Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SdhR2 in Geobacter lovleyi SZ

Properties
Regulator type: Transcription factor
TF locus tag: Glov_0874
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Regulog: SdhR2 - Desulfuromonadales
Statistics of regulated genes:
- Genes 32
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 66 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -265
Score: 5.7
Sequence: AGGTATACTGTATACAA
Locus tag: Glov_3139
Name: hemL
Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
Glov_3139
hemL
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
Position: -72
Score: 5.9
Sequence: TTGTATACACTATACAC
Locus tag: Glov_1887
Name: acnB
Funciton: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
Glov_1887
acnB
Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
Position: -80
Score: 5.3
Sequence: TTGTATACAGTATATTC
Locus tag: Glov_1379
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
Glov_1379
gltA
Citrate synthase (si) (EC 2.3.3.1)
Position: -243
Score: 5.7
Sequence: TTGTATGCTGTATACAT
Locus tag: Glov_2214
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b558 subunit
Locus tag: Glov_2213
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Glov_2212
Name: frdB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Glov_2214
sdhC
Succinate dehydrogenase cytochrome b558 subunit
Glov_2213
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Glov_2212
frdB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -98
Score: 5.3
Sequence: AGGCATACTGTATACAA
Locus tag: Glov_0660
Name: sfrB
Funciton: Fe(III) reductase, beta subunit
Locus tag: Glov_0661
Name: sfrA
Funciton: Fe(III) reductase, alpha subunit
Glov_0660
sfrB
Fe(III) reductase, beta subunit
Glov_0661
sfrA
Fe(III) reductase, alpha subunit
Position: -160
Score: 6.2
Sequence: TTGTATACAGTATGCAC
Locus tag: Glov_0875
Name: Gura_4160
Funciton: K+ transport systems, NAD-binding component
Locus tag: Glov_0876
Name: Gura_4159
Funciton: Sugar phosphate isomerases/epimerases
Locus tag: Glov_0877
Name: galE
Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
Glov_0875
Gura_4160
K+ transport systems, NAD-binding component
Glov_0876
Gura_4159
Sugar phosphate isomerases/epimerases
Glov_0877
galE
UDP-glucose 4-epimerase (EC 5.1.3.2)
Position: -53
Score: 5.7
Sequence: TTGTATACAGTATACCT
Locus tag: Glov_3138
Name: nuoA-1
Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: Glov_3137
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: Glov_3136
Name: nuoC
Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: Glov_3135
Name: nouD
Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: Glov_3134
Name: nuoE-1
Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Locus tag: Glov_3133
Name: nouF
Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Locus tag: Glov_3132
Name: Gura_4238
Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Locus tag: Glov_3131
Name: nuoH-1
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: Glov_3130
Name: nuoI-1
Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: Glov_3129
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: Glov_3128
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: Glov_3127
Name: nuoL-1
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: Glov_3126
Name: nuoM-1
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: Glov_3125
Name: nuoN-2
Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
Glov_3138
nuoA-1
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Glov_3137
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Glov_3136
nuoC
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Glov_3135
nouD
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Glov_3134
nuoE-1
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Glov_3133
nouF
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Glov_3132
Gura_4238
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Glov_3131
nuoH-1
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Glov_3130
nuoI-1
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Glov_3129
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Glov_3128
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Glov_3127
nuoL-1
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Glov_3126
nuoM-1
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Glov_3125
nuoN-2
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
Position: -52
Score: 6.2
Sequence: GTGCATACTGTATACAA
Locus tag: Glov_0874
Name: sdhR2
Funciton: Transcriptional regulator of central carbohydrate metabolism, GntR family
Glov_0874
sdhR2
Transcriptional regulator of central carbohydrate metabolism, GntR family
Position: -105
Score: 6.2
Sequence: TTGCATACTGTATACAC
Locus tag: Glov_1624
Name: icd
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Locus tag: Glov_1625
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Glov_1626
Name: Gura_2192
Funciton: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3)
Locus tag: Glov_1627
Name: Gura_2191
Funciton: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
Locus tag: Glov_1628
Name: Gura_2190
Funciton: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
Locus tag: Glov_1629
Name: Gura_2189
Funciton: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3)
Glov_1624
icd
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Glov_1625
mdh
Malate dehydrogenase (EC 1.1.1.37)
Glov_1626
Gura_2192
2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3)
Glov_1627
Gura_2191
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
Glov_1628
Gura_2190
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
Glov_1629
Gura_2189
2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3)
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