Regulon of SdhR2 in Geobacter sp. FRC-32

Properties
Regulator type:	Transcription factor
TF locus tag:	Geob_0562
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR2 - Desulfuromonadales
Statistics of regulated genes:
- Genes	27
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 66 sites [see more]

Member of regulog collections

By taxonomy - Desulfuromonadales
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -105 Score: 5.9 Sequence: TTGTATACAGTATGCCA Locus tag: Geob_2657 Name: acnB Funciton: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
	Geob_2657	acnB	Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
Position: -214 Score: 5.1 Sequence: TTGTATACAGTATATTT Locus tag: Geob_3549 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	Geob_3549	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -266 Score: 5.7 Sequence: TAGTATACAGTATACAT Locus tag: Geob_1882 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b558 subunit Locus tag: Geob_1883 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Geob_1884 Name: frdB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Geob_1882	sdhC	Succinate dehydrogenase cytochrome b558 subunit
	Geob_1883	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Geob_1884	frdB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -101 Score: 6.5 Sequence: TTGCATACTGTATACAA Locus tag: Geob_1607 Name: sfrB Funciton: Fe(III) reductase, beta subunit Locus tag: Geob_1608 Name: sfrA Funciton: Fe(III) reductase, alpha subunit
	Geob_1607	sfrB	Fe(III) reductase, beta subunit
	Geob_1608	sfrA	Fe(III) reductase, alpha subunit
Position: -114 Score: 5.9 Sequence: CTGTATACAGTATACTA Locus tag: Geob_0462 Name: nuoA-1 Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) Locus tag: Geob_0463 Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) Locus tag: Geob_0464 Name: nuoC Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) Locus tag: Geob_0465 Name: nouD Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) Locus tag: Geob_0466 Name: nuoE-1 Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) Locus tag: Geob_0467 Name: nouF Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) Locus tag: Geob_0468 Name: Gura_4238 Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) Locus tag: Geob_0469 Name: nuoH-1 Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) Locus tag: Geob_0470 Name: Geob_0470 Funciton: NADH-quinone oxidoreductase, chain I Locus tag: Geob_0471 Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) Locus tag: Geob_0472 Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) Locus tag: Geob_0473 Name: nuoL-1 Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Locus tag: Geob_0474 Name: nuoM-1 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) Locus tag: Geob_0475 Name: nuoN-2 Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
	Geob_0462	nuoA-1	NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
	Geob_0463	nuoB	NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
	Geob_0464	nuoC	NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
	Geob_0465	nouD	NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
	Geob_0466	nuoE-1	NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
	Geob_0467	nouF	NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
	Geob_0468	Gura_4238	NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
	Geob_0469	nuoH-1	NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
	Geob_0470	Geob_0470	NADH-quinone oxidoreductase, chain I
	Geob_0471	nuoJ	NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
	Geob_0472	nuoK	NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
	Geob_0473	nuoL-1	NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
	Geob_0474	nuoM-1	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
	Geob_0475	nuoN-2	NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
Position: -181 Score: 6.8 Sequence: TTGTATACTGTATACAA Locus tag: Geob_2663 Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) Locus tag: Geob_2664 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	Geob_2663	icd	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	Geob_2664	mdh	Malate dehydrogenase (EC 1.1.1.37)
Position: -41 Score: 6.8 Sequence: TTGTATACTGTATACAA Locus tag: Geob_0562 Name: sdhR2 Funciton: Transcriptional regulator of central carbohydrate metabolism, GntR family
	Geob_0562	sdhR2	Transcriptional regulator of central carbohydrate metabolism, GntR family
Position: -196 Score: 5.9 Sequence: TAGTATACTGTATACAG Locus tag: Geob_0461 Name: hemL Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
	Geob_0461	hemL	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
Position: -137 Score: 6.8 Sequence: TTGTATACAGTATACAA Locus tag: Geob_0563 Name: Gura_4160 Funciton: K+ transport systems, NAD-binding component Locus tag: Geob_0564 Name: Gura_4159 Funciton: Sugar phosphate isomerases/epimerases
	Geob_0563	Gura_4160	K+ transport systems, NAD-binding component
	Geob_0564	Gura_4159	Sugar phosphate isomerases/epimerases

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of SdhR2 in Geobacter sp. FRC-32

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --