Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SdhR2 in Desulfuromonas acetoxidans DSM 684

Properties
Regulator type: Transcription factor
TF locus tag: Dace_1458
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Regulog: SdhR2 - Desulfuromonadales
Statistics of regulated genes:
- Genes 31
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 66 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -130
Score: 5.3
Sequence: TCGTATACAGTACACAG
Locus tag: Dace_0315
Name: acnB
Funciton: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
acnB
Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)

Position: -113
Score: 5.9
Sequence: TTGCATATTGTATACAA
Locus tag: Dace_0149
Name: Glov_3720
Funciton: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
Locus tag: Dace_0150
Name: null
Funciton: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
Glov_3720
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)

Position: -205
Score: 5.6
Sequence: TAGAATACTGTATACAA
Locus tag: Dace_0517
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
gltA
Citrate synthase (si) (EC 2.3.3.1)

Position: -264
Score: 5.9
Sequence: TTGTATACAGTATTCAG
Locus tag: Dace_3258
Name: nuoA
Funciton: NADH-ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: Dace_3257
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: Dace_3256
Name: nuoC
Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: Dace_3255
Name: nuoD
Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: Dace_3254
Name: nuoH
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: Dace_3253
Name: nuoI
Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: Dace_3252
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: Dace_3251
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: Dace_3250
Name: nuoL
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoA
NADH-ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoC
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
nuoD
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
nuoH
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
nuoI
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)

Position: -279
Score: 5.3
Sequence: ATGCACACTGTATACAA
Locus tag: Dace_1172
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b558 subunit
Locus tag: Dace_1171
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Dace_1170
Name: frdB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC
Succinate dehydrogenase cytochrome b558 subunit
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
frdB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)

Position: -121
Score: 6.2
Sequence: CTGCATACTGTATACAA
Locus tag: Dace_2865
Name: sfrB
Funciton: Fe(III) reductase, beta subunit
Locus tag: Dace_2864
Name: sfrA
Funciton: Fe(III) reductase, alpha subunit
sfrB
Fe(III) reductase, beta subunit
sfrA
Fe(III) reductase, alpha subunit

Position: -131
Score: 5.6
Sequence: TTGCATACAGTATACTC
Locus tag: Dace_3231
Name: nuoA-1
Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: Dace_3230
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: Dace_3229
Name: nuoC
Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: Dace_3228
Name: nouD
Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: Dace_3227
Name: nuoH-1
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: Dace_3226
Name: Geob_0470
Funciton: NADH-quinone oxidoreductase, chain I
Locus tag: Dace_3225
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: Dace_3224
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: Dace_3223
Name: nuoL-1
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: Dace_3222
Name: nuoM-1
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: Dace_3221
Name: nuoN-2
Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
nuoA-1
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoC
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
nouD
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
nuoH-1
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Geob_0470
NADH-quinone oxidoreductase, chain I
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL-1
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoM-1
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoN-2
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)

Position: -121
Score: 6
Sequence: CTGTATACAGTATACAT
Locus tag: Dace_1458
Name: sdhR2
Funciton: Transcriptional regulator of central carbohydrate metabolism, GntR family
sdhR2
Transcriptional regulator of central carbohydrate metabolism, GntR family

Position: -108
Score: 6
Sequence: ATGTATACTGTATACAG
Locus tag: Dace_1459
Name: Gura_4160
Funciton: K+ transport systems, NAD-binding component
Gura_4160
K+ transport systems, NAD-binding component
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