Regulog CC1627 - Caulobacterales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sugar utilization |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Caulobacterales
- By TF family - LacI
- By pathway - Sugar utilization
| Genome | Genes | Operons |
|---|---|---|
| Caulobacter crescentus CB15 | 9 | 4 |
| Caulobacter segnis ATCC 21756 | 8 | 3 |
| Caulobacter sp. K31 | 11 | 5 |
| Phenylobacterium zucineum HLK1 | 8 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| CC1628 |
*
Caulobacter crescentus CB15 Site: position = -81 score = 4.72593 sequence = CGATGAATTCGATTACATTG Gene: CC1628: nucleoside:H symporter |
*
Caulobacter segnis ATCC 21756 Site: position = -81 score = 4.40495 sequence = CGATGATTTCGATTACATCG Gene: Cseg_2113: nucleoside:H symporter |
*
Caulobacter sp. K31 Site: position = -83 score = 4.3289 sequence = CGATGATTTCGATTACATCA Gene: Caul_4612: nucleoside:H symporter |
*
Phenylobacterium zucineum HLK1 Site: position = -67 score = 5.36433 sequence = ACGTGTAATCGATTACATCG Gene: PHZ_c2157: nucleoside:H symporter |
nucleoside:H symporter |
| CC1629 |
Gene: CC1629: Sugar phosphate isomerases/epimerases |
Gene: Cseg_2112: Sugar phosphate isomerases/epimerases |
Gene: Caul_4611: Sugar phosphate isomerases/epimerases |
Gene: PHZ_c2156: Sugar phosphate isomerases/epimerases |
Sugar phosphate isomerases/epimerases |
| CC1630 |
Gene: CC1630: Oxidoreductase (EC 1.1.1.-) |
Gene: Cseg_2111: Oxidoreductase (EC 1.1.1.-) |
*2
Caulobacter sp. K31 Gene: Caul_4610: Oxidoreductase (EC 1.1.1.-) Site: position = -51 score = 4.82579 sequence = ATATGTAATCGAATACACAA Gene: Caul_0426: Oxidoreductase (EC 1.1.1.-) |
Gene: PHZ_c2155: Oxidoreductase (EC 1.1.1.-) |
Oxidoreductase (EC 1.1.1.-) |
| CC1631 |
Gene: CC1631: Sugar phosphate isomerases/epimerases |
Gene: Cseg_2110: Sugar phosphate isomerases/epimerases |
2
Caulobacter sp. K31 Gene: Caul_4609: Sugar phosphate isomerases/epimerases Gene: Caul_0427: Sugar phosphate isomerases/epimerases |
Gene: PHZ_c2154: Sugar phosphate isomerases/epimerases |
Sugar phosphate isomerases/epimerases |
| CC1634 |
*
Caulobacter crescentus CB15 Site: position = -117 score = 4.71282 sequence = CAATGTAACCCATTTCATGG Gene: CC1634: Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site |
*
Caulobacter segnis ATCC 21756 Site: position = -119 score = 4.71282 sequence = CAATGTAACCCATTTCATGG Gene: Cseg_2107: Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site |
*
Caulobacter sp. K31 Site: position = -118 score = 4.71282 sequence = CAATGTAACCCATTTCATGG Gene: Caul_4606: Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site |
Gene: PHZ_c2153: Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site |
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site |
| CC1635 |
Gene: CC1635: hypothetical protein |
Gene: Cseg_2106: hypothetical protein |
Gene: Caul_4605: hypothetical protein |
Gene: PHZ_c2152: hypothetical protein |
hypothetical protein |
| PHZ_c2151 |
|
|
|
Gene: PHZ_c2151: hypothetical protein |
hypothetical protein |
| cyc |
Gene: CC1632: Cytochrome c2 |
Gene: Cseg_2109: Cytochrome c2 |
Gene: Caul_4608: Cytochrome c2 |
Gene: PHZ_c0286: Cytochrome c2 |
Cytochrome c2 |
| CRON 2. | |||||
| CC1627 |
*
Caulobacter crescentus CB15 Site: position = -116 score = 4.72593 sequence = CAATGTAATCGAATTCATCG Gene: CC1627: Transcriptional regulator, LacI family |
*
Caulobacter segnis ATCC 21756 Site: position = -118 score = 4.40495 sequence = CGATGTAATCGAAATCATCG Gene: Cseg_2114: Transcriptional regulator, LacI family |
*
Caulobacter sp. K31 Site: position = -119 score = 4.3289 sequence = TGATGTAATCGAAATCATCG Gene: Caul_4613: Transcriptional regulator, LacI family |
*
Phenylobacterium zucineum HLK1 Site: position = -40 score = 5.36433 sequence = CGATGTAATCGATTACACGT Gene: PHZ_c2158: Transcriptional regulator, LacI family |
Transcriptional regulator, LacI family |
| CRON 3. | |||||
| PF06439 |
*
Caulobacter crescentus CB15 Site: position = -54 score = 4.71282 sequence = CCATGAAATGGGTTACATTG Gene: CC1633: Domain of Unknown Function (DUF1080) |
Gene: Cseg_2108: Domain of Unknown Function (DUF1080) |
*
Caulobacter sp. K31 Site: position = -78 score = 4.71282 sequence = CCATGAAATGGGTTACATTG Gene: Caul_4607: Domain of Unknown Function (DUF1080) |
|
Domain of Unknown Function (DUF1080) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |