Statistics of regulated genes

Genome	Genes	Operons
Rhodobacter sphaeroides 2.4.1
Paracoccus denitrificans PD1222
Jannaschia sp. CCS1
Rhodobacterales bacterium HTCC2654
Oceanicola granulosus HTCC2516	2	2
Loktanella vestfoldensis SKA53
Oceanicola batsensis HTCC2597
Roseovarius nubinhibens ISM	2	2
Roseovarius sp. 217
Sulfitobacter sp. EE-36	2	2
Silicibacter TM1040	3	3
Silicibacter pomeroyi DSS-3	2	2
Roseobacter sp. MED193	3	3
Hyphomonas neptunium ATCC 15444	2	2
Oceanicaulis alexandrii HTCC2633	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes																Function
CRON 1.
soxR	Rhodobacter sphaeroides 2.4.1	Paracoccus denitrificans PD1222	Jannaschia sp. CCS1	Rhodobacterales bacterium HTCC2654	* Oceanicola granulosus HTCC2516 Site: position = -36 score = 6.22183 sequence = TTCTCAAGTTAACTTCAGAT Gene: OG2516_02024: Redox-sensitive transcriptional activator, MerR family	Loktanella vestfoldensis SKA53	Oceanicola batsensis HTCC2597	* Roseovarius nubinhibens ISM Site: position = -36 score = 6.45993 sequence = TTCTCAAGTTAACTTGAGAT Gene: ISM_04630: Redox-sensitive transcriptional activator, MerR family	Roseovarius sp. 217	* Sulfitobacter sp. EE-36 Site: position = -38 score = 5.95359 sequence = TTCTAAACCTAAGTTTAGGT Gene: EE36_04103: Redox-sensitive transcriptional activator, MerR family	* Silicibacter TM1040 Site: position = -103 score = 6.07595 sequence = TTCTAAACCTAACTTTAGCT Gene: TM1040_3746: Redox-sensitive transcriptional activator, MerR family	* Silicibacter pomeroyi DSS-3 Site: position = -43 score = 6.07595 sequence = TTCTAAACCTAACTTTAGGT Gene: SPO0314: Redox-sensitive transcriptional activator, MerR family	* Roseobacter sp. MED193 Site: position = -57 score = 6.07595 sequence = TTCTAAACCTAACTTTAGCT Gene: MED193_10733: Redox-sensitive transcriptional activator, MerR family	* Hyphomonas neptunium ATCC 15444 Site: position = -35 score = 6.1795 sequence = ATCTCAAGTTCACTTTAGAT Gene: HNE_3426: Redox-sensitive transcriptional activator, MerR family	* Oceanicaulis alexandrii HTCC2633 Site: position = -54 score = 6.33757 sequence = TTCTCAAGCTAACTTGAGAT Gene: OA2633_12050: Redox-sensitive transcriptional activator, MerR family	Redox-sensitive transcriptional activator, MerR family
CRON 2.
PF00903	Rhodobacter sphaeroides 2.4.1	Paracoccus denitrificans PD1222	Jannaschia sp. CCS1	Rhodobacterales bacterium HTCC2654	* Oceanicola granulosus HTCC2516 Site: position = -73 score = 6.22183 sequence = ATCTGAAGTTAACTTGAGAA Gene: OG2516_02029: Glyoxalase/bleomycin resistance protein/dioxygenase	Loktanella vestfoldensis SKA53	Oceanicola batsensis HTCC2597	* Roseovarius nubinhibens ISM Site: position = -62 score = 6.45993 sequence = ATCTCAAGTTAACTTGAGAA Gene: ISM_04625: Glyoxalase/bleomycin resistance protein/dioxygenase	Roseovarius sp. 217	* Sulfitobacter sp. EE-36 Site: position = -69 score = 5.95359 sequence = ACCTAAACTTAGGTTTAGAA Gene: EE36_04108: Glyoxalase/bleomycin resistance protein/dioxygenase	* Silicibacter TM1040 Site: position = -62 score = 6.07595 sequence = AGCTAAAGTTAGGTTTAGAA Gene: TM1040_3747: Glyoxalase/bleomycin resistance protein/dioxygenase	* Silicibacter pomeroyi DSS-3 Site: position = -61 score = 6.07595 sequence = ACCTAAAGTTAGGTTTAGAA Gene: SPO0313: Glyoxalase/bleomycin resistance protein/dioxygenase	* Roseobacter sp. MED193 Site: position = -71 score = 6.07595 sequence = AGCTAAAGTTAGGTTTAGAA Gene: MED193_10738: Glyoxalase/bleomycin resistance protein/dioxygenase	* Hyphomonas neptunium ATCC 15444 Site: position = -66 score = 6.1795 sequence = ATCTAAAGTGAACTTGAGAT Gene: HNE_3425: Glyoxalase/bleomycin resistance protein/dioxygenase	Oceanicaulis alexandrii HTCC2633	Glyoxalase/bleomycin resistance protein/dioxygenase
CRON 3.
PF01370	Rhodobacter sphaeroides 2.4.1	Paracoccus denitrificans PD1222	Jannaschia sp. CCS1	Rhodobacterales bacterium HTCC2654	Oceanicola granulosus HTCC2516	Loktanella vestfoldensis SKA53	Oceanicola batsensis HTCC2597	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Sulfitobacter sp. EE-36	Silicibacter TM1040 Gene: TM1040_0373: NAD-dependent epimerase/dehydratase	Silicibacter pomeroyi DSS-3 Gene: SPO2846: NAD-dependent epimerase/dehydratase	* Roseobacter sp. MED193 Site: position = -57 score = 6.23756 sequence = AGCTAAAGTTAGCTTTAGAT Gene: MED193_22126: NAD-dependent epimerase/dehydratase	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	NAD-dependent epimerase/dehydratase
CRON 4.
OA2633_12045	Rhodobacter sphaeroides 2.4.1	Paracoccus denitrificans PD1222	Jannaschia sp. CCS1	Rhodobacterales bacterium HTCC2654	Oceanicola granulosus HTCC2516	Loktanella vestfoldensis SKA53	Oceanicola batsensis HTCC2597	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Sulfitobacter sp. EE-36	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	* Oceanicaulis alexandrii HTCC2633 Site: position = -63 score = 6.33757 sequence = ATCTCAAGTTAGCTTGAGAA Gene: OA2633_12045: hypothetical protein	hypothetical protein
CRON 5.
PF00903	Rhodobacter sphaeroides 2.4.1	Paracoccus denitrificans PD1222	Jannaschia sp. CCS1	Rhodobacterales bacterium HTCC2654	Oceanicola granulosus HTCC2516	Loktanella vestfoldensis SKA53	Oceanicola batsensis HTCC2597	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Sulfitobacter sp. EE-36	* Silicibacter TM1040 Site: position = -93 score = 5.75271 sequence = ATCTAAAGTGAGCTTGAGGA Gene: TM1040_1863: Glyoxalase/bleomycin resistance protein/dioxygenase	Silicibacter pomeroyi DSS-3 Gene: SPOA0321: Glyoxalase/bleomycin resistance protein/dioxygenase	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Glyoxalase/bleomycin resistance protein/dioxygenase

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