Profile of regulator SoxR in Rhodobacterales
Properties
| Regulator family: |
MerR |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Superoxide stress response |
| Effector: |
Paraquat |
| Regulog: |
SoxR - Rhodobacterales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Oceanicola granulosus HTCC2516
|
|
OG2516_02029 |
PF00903 |
-73 |
6.2 |
ATCTGAAGTTAACTTGAGAA |
|
OG2516_02024 |
soxR |
-36 |
6.2 |
TTCTCAAGTTAACTTCAGAT |
|
Roseovarius nubinhibens ISM
|
|
ISM_04625 |
PF00903 |
-62 |
6.5 |
ATCTCAAGTTAACTTGAGAA |
|
ISM_04630 |
soxR |
-36 |
6.5 |
TTCTCAAGTTAACTTGAGAT |
|
Sulfitobacter sp. EE-36
|
|
EE36_04103 |
soxR |
-38 |
6 |
TTCTAAACCTAAGTTTAGGT |
|
EE36_04108 |
PF00903 |
-69 |
6 |
ACCTAAACTTAGGTTTAGAA |
|
Silicibacter TM1040
|
|
TM1040_3746 |
soxR |
-103 |
6.1 |
TTCTAAACCTAACTTTAGCT |
|
TM1040_1863 |
PF00903 |
-93 |
5.8 |
ATCTAAAGTGAGCTTGAGGA |
|
TM1040_3747 |
PF00903 |
-62 |
6.1 |
AGCTAAAGTTAGGTTTAGAA |
|
Silicibacter pomeroyi DSS-3
|
|
SPO0314 |
soxR |
-43 |
6.1 |
TTCTAAACCTAACTTTAGGT |
|
SPO0313 |
PF00903 |
-61 |
6.1 |
ACCTAAAGTTAGGTTTAGAA |
|
Roseobacter sp. MED193
|
|
MED193_10733 |
soxR |
-57 |
6.1 |
TTCTAAACCTAACTTTAGCT |
|
MED193_22126 |
PF01370 |
-57 |
6.2 |
AGCTAAAGTTAGCTTTAGAT |
|
MED193_10738 |
PF00903 |
-71 |
6.1 |
AGCTAAAGTTAGGTTTAGAA |
|
Hyphomonas neptunium ATCC 15444
|
|
HNE_3426 |
soxR |
-35 |
6.2 |
ATCTCAAGTTCACTTTAGAT |
|
HNE_3425 |
PF00903 |
-66 |
6.2 |
ATCTAAAGTGAACTTGAGAT |
|
Oceanicaulis alexandrii HTCC2633
|
|
OA2633_12045 |
null |
-63 |
6.3 |
ATCTCAAGTTAGCTTGAGAA |
|
OA2633_12050 |
soxR |
-54 |
6.3 |
TTCTCAAGCTAACTTGAGAT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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