Regulon of SoxR in Silicibacter TM1040
| Regulator type: | Transcription factor |
| TF locus tag: | TM1040_3746 |
| Regulator family: | MerR |
| Regulation mode: | activator (repressor) |
| Biological process: | Superoxide stress response |
| Effector: | Paraquat |
| Regulog: | SoxR - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - SoxR
- By TF family - MerR
- By effector - Paraquat
- By pathway - Superoxide stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -93
Score: 5.8 Sequence: ATCTAAAGTGAGCTTGAGGA
Locus tag: TM1040_1863
Name: PF00903 Funciton: Glyoxalase/bleomycin resistance protein/dioxygenase |
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PF00903
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Glyoxalase/bleomycin resistance protein/dioxygenase
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Position: -62
Score: 6.1 Sequence: AGCTAAAGTTAGGTTTAGAA
Locus tag: TM1040_3747
Name: PF00903 Funciton: Glyoxalase/bleomycin resistance protein/dioxygenase |
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PF00903
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Glyoxalase/bleomycin resistance protein/dioxygenase
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Position: -103
Score: 6.1 Sequence: TTCTAAACCTAACTTTAGCT
Locus tag: TM1040_3746
Name: soxR Funciton: Redox-sensitive transcriptional activator, MerR family |
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soxR
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Redox-sensitive transcriptional activator, MerR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |