Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SoxR in Silicibacter TM1040

Properties
Regulator type: Transcription factor
TF locus tag: TM1040_3746
Regulator family: MerR
Regulation mode: activator (repressor)
Biological process: Superoxide stress response
Effector: Paraquat
Regulog: SoxR - Rhodobacterales
Statistics of regulated genes:
- Genes 3
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 18 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -93
Score: 5.8
Sequence: ATCTAAAGTGAGCTTGAGGA
Locus tag: TM1040_1863
Name: PF00903
Funciton: Glyoxalase/bleomycin resistance protein/dioxygenase
PF00903
Glyoxalase/bleomycin resistance protein/dioxygenase

Position: -62
Score: 6.1
Sequence: AGCTAAAGTTAGGTTTAGAA
Locus tag: TM1040_3747
Name: PF00903
Funciton: Glyoxalase/bleomycin resistance protein/dioxygenase
PF00903
Glyoxalase/bleomycin resistance protein/dioxygenase

Position: -103
Score: 6.1
Sequence: TTCTAAACCTAACTTTAGCT
Locus tag: TM1040_3746
Name: soxR
Funciton: Redox-sensitive transcriptional activator, MerR family
soxR
Redox-sensitive transcriptional activator, MerR family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD