Regulog PurR - Vibrionales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Purine metabolism |
| Effector: | Hypoxanthine; Guanine |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PurR
- By taxonomy - Vibrionales
- By TF family - LacI
- By effector - Hypoxanthine
- By effector - Guanine
- By pathway - Purine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Vibrio cholerae O1 biovar eltor str. N16961 | 19 | 15 |
| Vibrio vulnificus CMCP6 | 20 | 15 |
| Vibrio harveyi ATCC BAA-1116 | 21 | 17 |
| Vibrio parahaemolyticus RIMD 2210633 | 20 | 15 |
| Vibrio shilonii AK1 | 20 | 15 |
| Vibrio splendidus LGP32 | 20 | 16 |
| Vibrio fischeri ES114 | 19 | 15 |
| Vibrio salmonicida LFI1238 | 16 | 13 |
| Vibrio angustum S14 | 17 | 12 |
| Photobacterium profundum SS9 | 18 | 15 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| cvpA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -64 score = 6.01858 sequence = AAGAAAACGTTTGCGT Gene: VC1003: Colicin V production protein |
*
Vibrio vulnificus CMCP6 Site: position = -63 score = 6.01858 sequence = AAGAAAACGTTTGCGT Gene: VV1_1996: Colicin V production protein |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -63 score = 6.01858 sequence = AAGAAAACGTTTGCGT Gene: VIBHAR_03096: Colicin V production protein |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -63 score = 6.01858 sequence = AAGAAAACGTTTGCGT Gene: VP2186: Colicin V production protein |
*
Vibrio shilonii AK1 Site: position = -63 score = 6.01858 sequence = AAGAAAACGTTTGCGT Gene: VSAK1_10118: Colicin V production protein |
*
Vibrio splendidus LGP32 Site: position = -63 score = 6.01858 sequence = AAGAAAACGTTTGCGT Gene: VS_0907: Colicin V production protein |
*
Vibrio fischeri ES114 Site: position = -63 score = 6.01858 sequence = AAGAAAACGTTTGCGT Gene: VF_1692: Colicin V production protein |
*
Vibrio salmonicida LFI1238 Site: position = -63 score = 6.01858 sequence = AAGAAAACGTTTGCGT Gene: VSAL_I1079: Colicin V production protein |
*
Vibrio angustum S14 Site: position = -64 score = 5.90823 sequence = AAGTAAACGTTTGCGT Gene: VAS14_06263: Colicin V production protein |
*
Photobacterium profundum SS9 Site: position = -63 score = 5.79035 sequence = AGGTAAACGTTTGCGT Gene: PBPRA2649: Colicin V production protein |
Colicin V production protein |
| purF |
Gene: VC1004: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Gene: VV1_1997: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Gene: VIBHAR_03095: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Gene: VP2185: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Gene: VSAK1_10113: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Gene: VS_0908: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Gene: VF_1691: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Gene: VSAL_I1080: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Gene: VAS14_06258: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Gene: PBPRA2648: Amidophosphoribosyltransferase (EC 2.4.2.14) |
Amidophosphoribosyltransferase (EC 2.4.2.14) |
| CRON 2. | |||||||||||
| pyrD |
Gene: VC1491: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
Gene: VV1_2637: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -194 score = 5.19689 sequence = ATGAAATCGTTTGCTT Gene: VIBHAR_02339: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
Gene: VP1601: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
*
Vibrio shilonii AK1 Site: position = -107 score = 4.69466 sequence = GCCTAATCGTTTGCGT Gene: VSAK1_05275: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
*
Vibrio splendidus LGP32 Site: position = -145 score = 5.41528 sequence = ACGATAACGTTTGCTT Gene: VS_1422: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
*
Vibrio fischeri ES114 Site: position = -245 score = 5.14593 sequence = AGCCAAACGTTTGCTC Gene: VF_1285: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
*
Vibrio salmonicida LFI1238 Site: position = -246 score = 4.90631 sequence = AGACAAACGTTTGCAT Gene: VSAL_I1549: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
*
Vibrio angustum S14 Site: position = -185 score = 5.38366 sequence = AAGAAAACGATTGCTT Gene: VAS14_02903: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
*
Photobacterium profundum SS9 Site: position = -184 score = 5.44456 sequence = ACGGAATCGTTTGCGT Gene: PBPRA1767: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
Dihydroorotate dehydrogenase (EC 1.3.3.1) |
| CRON 3. | |||||||||||
| guaB |
Gene: VC0767: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
Gene: VV1_0419: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
Gene: VIBHAR_01076: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
Gene: VP0616: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
Gene: VSAK1_12015: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
Gene: VS_0628: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
Gene: VF_0637: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
Gene: VSAL_I0737a: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
*
Vibrio angustum S14 Site: position = -82 score = 5.50291 sequence = AGCCAAACGTTTGCTT Gene: VAS14_16521: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
*
Photobacterium profundum SS9 Site: position = -82 score = 4.87157 sequence = AGCCAAACGATTGCTT Gene: PBPRA0780: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
| guaA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -106 score = 5.66293 sequence = GCGTAAACGTTTGCTT Gene: VC0768: GMP synthase (EC 6.3.5.2) |
Gene: VV1_0418: GMP synthase (EC 6.3.5.2) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -91 score = 5.94943 sequence = ACGTAAACGTTTGCTT Gene: VIBHAR_01077: GMP synthase (EC 6.3.5.2) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -91 score = 5.94943 sequence = ACGTAAACGTTTGCTT Gene: VP0617: GMP synthase (EC 6.3.5.2) |
*
Vibrio shilonii AK1 Site: position = -91 score = 5.94943 sequence = ACGTAAACGTTTGCTT Gene: VSAK1_12010: GMP synthase (EC 6.3.5.2) |
*
Vibrio splendidus LGP32 Site: position = -90 score = 6.05978 sequence = ACGAAAACGTTTGCTT Gene: VS_0629: GMP synthase (EC 6.3.5.2) |
Gene: VF_0638: GMP synthase (EC 6.3.5.2) |
Gene: VSAL_I0738: GMP synthase (EC 6.3.5.2) |
Gene: VAS14_16526: GMP synthase (EC 6.3.5.2) |
*
Photobacterium profundum SS9 Site: position = -91 score = 5.89434 sequence = ACGAAAACGTTTGCCT Gene: PBPRA0781: GMP synthase (EC 6.3.5.2) |
GMP synthase (EC 6.3.5.2) |
| CRON 4. | |||||||||||
| purC |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -10 score = 6.18396 sequence = AAGCAAACGTTTGCTT Gene: VC1190: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
*
Vibrio vulnificus CMCP6 Site: position = -134 score = 6.06608 sequence = AGGCAAACGTTTGCTT Gene: VV1_2797: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -134 score = 5.70084 sequence = TGGCAAACGTTTGCTT Gene: VIBHAR_02039: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -134 score = 6.06608 sequence = AGGCAAACGTTTGCTT Gene: VP1263: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
*
Vibrio shilonii AK1 Site: position = -126 score = 5.51806 sequence = GCGCAAACGTTTGCTA Gene: VSAK1_06165: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
*
Vibrio splendidus LGP32 Site: position = -116 score = 5.41003 sequence = TAGCAATCGTTTGCTT Gene: VS_1205: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
*
Vibrio fischeri ES114 Site: position = -90 score = 5.41003 sequence = TAGCAATCGTTTGCTT Gene: VF_1498: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
*
Vibrio salmonicida LFI1238 Site: position = -92 score = 5.77527 sequence = AAGCAATCGTTTGCTT Gene: VSAL_I1698: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
*
Vibrio angustum S14 Site: position = -138 score = 5.6419 sequence = AGGCAAACGTTTGCTA Gene: VAS14_04588: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
*
Photobacterium profundum SS9 Site: position = -143 score = 6.06608 sequence = AGGCAAACGTTTGCTT Gene: PBPRA1469: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
| CRON 5. | |||||||||||
| purE |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -89 score = 6.18396 sequence = AAGCAAACGTTTGCTT Gene: VC0052: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
*
Vibrio vulnificus CMCP6 Site: position = -89 score = 6.18396 sequence = AAGCAAACGTTTGCTT Gene: VV1_1054: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -73 score = 5.94223 sequence = GCGCAAACGTTTGCTT Gene: VIBHAR_00385: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -88 score = 6.22873 sequence = ACGCAAACGTTTGCTT Gene: VP3036: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
*
Vibrio shilonii AK1 Site: position = -82 score = 5.74066 sequence = ACGCAAACGTTTTCCT Gene: VSAK1_24370: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
*
Vibrio splendidus LGP32 Site: position = -88 score = 5.74066 sequence = ACGCAAACGTTTTCCT Gene: VS_3120: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
*
Vibrio fischeri ES114 Site: position = -86 score = 5.74066 sequence = ACGCAAACGTTTTCCT Gene: VF_2537: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
*
Vibrio salmonicida LFI1238 Site: position = -36 score = 5.74066 sequence = ACGCAAACGTTTTCCT Gene: VSAL_I0081: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
*
Vibrio angustum S14 Site: position = -83 score = 5.74066 sequence = ACGCAAACGTTTTCCT Gene: VAS14_22662: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
|
Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) |
| purK |
Gene: VC0051: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
Gene: VV1_1053: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
Gene: VIBHAR_00386: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
Gene: VP3037: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
Gene: VSAK1_24375: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
Gene: VS_3121: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
Gene: VF_2538: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
Gene: VSAL_I0080: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
Gene: VAS14_22657: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
|
Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
| CRON 6. | |||||||||||
| purH |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -187 score = 4.15292 sequence = TGCCAAACGATTGCGC Gene: VC0276: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
*
Vibrio vulnificus CMCP6 Site: position = -201 score = 4.15292 sequence = TGCCAAACGATTGCGC Gene: VV1_1227: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -198 score = 4.15292 sequence = TGCCAAACGATTGCGC Gene: VIBHAR_00210: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -196 score = 4.15292 sequence = TGCCAAACGATTGCGC Gene: VP2896: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
*2
Vibrio shilonii AK1 Site: position = -217 score = 4.15292 sequence = TGCCAAACGATTGCGC Gene: VSAK1_13483: bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Gene: VSAK1_13478: bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
*
Vibrio splendidus LGP32 Site: position = -237 score = 4.15292 sequence = TGCCAAACGATTGCGC Gene: VS_2951: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
*
Vibrio fischeri ES114 Site: position = -206 score = 4.38109 sequence = ATGCAATCGATTGCGC Gene: VF_2394: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
Gene: VSAL_I2842: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
*
Vibrio angustum S14 Site: position = -206 score = 6.18753 sequence = AAGCAAACGTTTGCGT Gene: VAS14_19086: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
*
Photobacterium profundum SS9 Site: position = -168 score = 5.90103 sequence = GAGCAAACGTTTGCGT Gene: PBPRA3419: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) |
| purD |
Gene: VC0275: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
Gene: VV1_1226: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
Gene: VIBHAR_00211: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
Gene: VP2898: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
Gene: VSAK1_13473: phosphoribosylamine--glycine ligase |
Gene: VS_2952: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
Gene: VF_2395: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
Gene: VSAL_I2843: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
Gene: VAS14_19091: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
Gene: PBPRA3420: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
| VP2897 |
|
|
|
Gene: VP2897: hypothetical protein |
|
|
|
|
|
|
Hypothetical protein |
| CRON 7. | |||||||||||
| purM |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -79 score = 5.74066 sequence = ACGCAAACGTTTTCCT Gene: VC2226: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Vibrio vulnificus CMCP6 Site: position = -81 score = 5.58525 sequence = GCGCAAACGTTTGCTC Gene: VV1_1900: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -82 score = 5.75978 sequence = AAGCAAACGTTTGCTA Gene: VIBHAR_03200: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -82 score = 5.80456 sequence = ACGCAAACGTTTGCTA Gene: VP2285: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Vibrio shilonii AK1 Site: position = -82 score = 5.74066 sequence = ACGCAAACGTTTTCCT Gene: VSAK1_07354: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Vibrio splendidus LGP32 Site: position = -81 score = 5.58525 sequence = GCGCAAACGTTTGCTC Gene: VS_2318: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Vibrio fischeri ES114 Site: position = -80 score = 5.60988 sequence = ACGCAAACGTTTCCCT Gene: VF_1928: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Vibrio salmonicida LFI1238 Site: position = -80 score = 5.60988 sequence = ACGCAAACGTTTCCCT Gene: VSAL_I2390: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Vibrio angustum S14 Site: position = -79 score = 5.74066 sequence = ACGCAAACGTTTTCCT Gene: VAS14_00448: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
*
Photobacterium profundum SS9 Site: position = -79 score = 5.60988 sequence = ACGCAAACGTTTCCCT Gene: PBPRA2910: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) |
| purN |
Gene: VC2227: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: VV1_1899: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: VIBHAR_03201: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: VP2286: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: VSAK1_07349: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: VS_2319: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: VF_1929: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: VSAL_I2391: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: VAS14_00443: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Gene: PBPRA2911: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
| CRON 8. | |||||||||||
| purL |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -170 score = 5.88365 sequence = ACGCAAACGGTTGCTT Gene: VC0869: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
*
Vibrio vulnificus CMCP6 Site: position = -159 score = 5.88365 sequence = ACGCAAACGGTTGCTT Gene: VV1_0340: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -182 score = 5.88365 sequence = ACGCAAACGGTTGCTT Gene: VIBHAR_01150: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -159 score = 5.88365 sequence = ACGCAAACGGTTGCTT Gene: VP0666: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
*
Vibrio shilonii AK1 Site: position = -158 score = 6.06336 sequence = ACGAAAACGTTTGCGT Gene: VSAK1_11820: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
*
Vibrio splendidus LGP32 Site: position = -192 score = 5.88365 sequence = ACGCAAACGGTTGCTT Gene: VS_0664: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
*
Vibrio fischeri ES114 Site: position = -182 score = 5.88365 sequence = ACGCAAACGGTTGCTT Gene: VF_0652: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
*
Vibrio salmonicida LFI1238 Site: position = -183 score = 5.88365 sequence = ACGCAAACGGTTGCTT Gene: VSAL_I0750: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
*
Vibrio angustum S14 Site: position = -193 score = 5.88723 sequence = ACGCAAACGGTTGCGT Gene: VAS14_16561: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
*
Photobacterium profundum SS9 Site: position = -198 score = 5.60073 sequence = GCGCAAACGGTTGCGT Gene: PBPRA0788: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
| CRON 9. | |||||||||||
| purT |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -80 score = 5.86133 sequence = AAGCAAACGTTTTCTT Gene: VC1228: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
*
Vibrio vulnificus CMCP6 Site: position = -83 score = 6.18396 sequence = AAGCAAACGTTTGCTT Gene: VV1_2378: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -83 score = 5.94943 sequence = ACGTAAACGTTTGCTT Gene: VIBHAR_02115: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -83 score = 6.18396 sequence = AAGCAAACGTTTGCTT Gene: VP1297: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
*
Vibrio shilonii AK1 Site: position = -77 score = 5.94223 sequence = GCGCAAACGTTTGCTT Gene: VSAK1_25795: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
*
Vibrio splendidus LGP32 Site: position = -83 score = 5.94223 sequence = GCGCAAACGTTTGCTT Gene: VS_1717: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
*
Vibrio fischeri ES114 Site: position = -72 score = 5.82229 sequence = TAGCAAACGTTTGCGT Gene: VF_1487: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
*
Vibrio salmonicida LFI1238 Site: position = -74 score = 5.77885 sequence = AAGCAATCGTTTGCGT Gene: VSAL_I1686: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
*
Vibrio angustum S14 Site: position = -82 score = 6.22873 sequence = ACGCAAACGTTTGCTT Gene: VAS14_03168: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
*
Photobacterium profundum SS9 Site: position = -73 score = 6.06965 sequence = AGGCAAACGTTTGCGT Gene: PBPRA1685: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
| CRON 10. | |||||||||||
| ushA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -262 score = 5.25771 sequence = AGTCAAACGTTTGCCT Gene: VC2174: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
*
Vibrio vulnificus CMCP6 Site: position = -244 score = 5.25771 sequence = AGTCAAACGTTTGCCT Gene: VV1_0248: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -232 score = 4.70612 sequence = AGCCAAACGATTGCCT Gene: VIBHAR_01256: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
Gene: VP0748: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
Gene: VSAK1_02119: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
*
Vibrio splendidus LGP32 Site: position = -203 score = 5.10787 sequence = AAGTAAACGATTGCCT Gene: VS_0757: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
*
Vibrio fischeri ES114 Site: position = -220 score = 5.60793 sequence = ACGTAAACGGTTGCGT Gene: VF_0778: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
*
Vibrio salmonicida LFI1238 Site: position = -216 score = 4.63238 sequence = AAGTGAACGATTGCGT Gene: VSAL_I0800: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
Gene: VAS14_16439: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
Gene: PBPRA2836: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
| CRON 11. | |||||||||||
| folD |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -10 score = 6.01851 sequence = AAGCAAACGTTTGCCT Gene: VC1942: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
*
Vibrio vulnificus CMCP6 Site: position = -86 score = 6.18753 sequence = AAGCAAACGTTTGCGT Gene: VV1_2022: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -88 score = 6.18753 sequence = AAGCAAACGTTTGCGT Gene: VIBHAR_01391: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -87 score = 6.06965 sequence = AGGCAAACGTTTGCGT Gene: VP0879: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
*
Vibrio shilonii AK1 Site: position = -89 score = 5.77811 sequence = ATGCAAACGTTTGCGT Gene: VSAK1_08676: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
*
Vibrio splendidus LGP32 Site: position = -96 score = 6.18396 sequence = AAGCAAACGTTTGCTT Gene: VS_0889: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
*
Vibrio fischeri ES114 Site: position = -86 score = 5.87175 sequence = ACGCAAACGTTTGCTC Gene: VF_1770: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
*
Vibrio salmonicida LFI1238 Site: position = -85 score = 6.18753 sequence = AAGCAAACGTTTGCGT Gene: VSAL_I2209: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
*
Vibrio angustum S14 Site: position = -87 score = 5.83055 sequence = AAGCAAACGTTTGCGC Gene: VAS14_06223: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
*
Photobacterium profundum SS9 Site: position = -86 score = 5.83055 sequence = AAGCAAACGTTTGCGC Gene: PBPRA2641: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
| CRON 12. | |||||||||||
| glyA |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -71 score = 6.06336 sequence = ACGAAAACGTTTGCGT Gene: VC0941: Serine hydroxymethyltransferase (EC 2.1.2.1) |
*
Vibrio vulnificus CMCP6 Site: position = -73 score = 6.06336 sequence = ACGAAAACGTTTGCGT Gene: VV1_0286: Serine hydroxymethyltransferase (EC 2.1.2.1) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -74 score = 6.06336 sequence = ACGAAAACGTTTGCGT Gene: VIBHAR_01208: Serine hydroxymethyltransferase (EC 2.1.2.1) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -74 score = 6.06336 sequence = ACGAAAACGTTTGCGT Gene: VP0715: Serine hydroxymethyltransferase (EC 2.1.2.1) |
*
Vibrio shilonii AK1 Site: position = -73 score = 6.05978 sequence = ACGAAAACGTTTGCTT Gene: VSAK1_10503: Serine hydroxymethyltransferase (EC 2.1.2.1) |
*
Vibrio splendidus LGP32 Site: position = -73 score = 5.84967 sequence = ACGGAAACGTTTGCTT Gene: VS_2373: Serine hydroxymethyltransferase (EC 2.1.2.1) |
*
Vibrio fischeri ES114 Site: position = -64 score = 5.95301 sequence = ACGTAAACGTTTGCGT Gene: VF_0695: Serine hydroxymethyltransferase (EC 2.1.2.1) |
*
Vibrio salmonicida LFI1238 Site: position = -64 score = 5.54433 sequence = ACGTAATCGTTTGCGT Gene: VSAL_I0864: Serine hydroxymethyltransferase (EC 2.1.2.1) |
*
Vibrio angustum S14 Site: position = -93 score = 6.06336 sequence = ACGAAAACGTTTGCGT Gene: VAS14_16581: Serine hydroxymethyltransferase (EC 2.1.2.1) |
*
Photobacterium profundum SS9 Site: position = -94 score = 6.06336 sequence = ACGAAAACGTTTGCGT Gene: PBPRA0795: Serine hydroxymethyltransferase (EC 2.1.2.1) |
Serine hydroxymethyltransferase (EC 2.1.2.1) |
| CRON 13. | |||||||||||
| upp |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -103 score = 5.9007 sequence = AGGAAAACGTTTGCGT Gene: VC2225: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Vibrio vulnificus CMCP6 Site: position = -107 score = 5.54404 sequence = GAGCAAACGTTTGCGC Gene: VV1_1901: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -106 score = 5.81871 sequence = TAGCAAACGTTTGCTT Gene: VIBHAR_03199: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -114 score = 5.82229 sequence = TAGCAAACGTTTGCGT Gene: VP2284: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Vibrio shilonii AK1 Site: position = -179 score = 5.9007 sequence = AGGAAAACGTTTGCGT Gene: VSAK1_07359: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Vibrio splendidus LGP32 Site: position = -89 score = 5.54404 sequence = GAGCAAACGTTTGCGC Gene: VS_2317: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Vibrio fischeri ES114 Site: position = -143 score = 5.69059 sequence = AGGGAAACGTTTGCGT Gene: VF_1927: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Vibrio salmonicida LFI1238 Site: position = -161 score = 5.69059 sequence = AGGGAAACGTTTGCGT Gene: VSAL_I2389: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Vibrio angustum S14 Site: position = -129 score = 5.9007 sequence = AGGAAAACGTTTGCGT Gene: VAS14_00453: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
*
Photobacterium profundum SS9 Site: position = -126 score = 5.69059 sequence = AGGGAAACGTTTGCGT Gene: PBPRA2909: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
Uracil phosphoribosyltransferase (EC 2.4.2.9) |
| CRON 14. | |||||||||||
| gsk |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -93 score = 5.48803 sequence = GTGCAAACGTTTGCTT Gene: VC1129: Inosine-guanosine kinase (EC 2.7.1.73) |
*
Vibrio vulnificus CMCP6 Site: position = -93 score = 5.39454 sequence = TAGCAAACGTTTGCTA Gene: VV1_2924: Inosine-guanosine kinase (EC 2.7.1.73) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -93 score = 5.06385 sequence = GTGCAAACGTTTGCTA Gene: VIBHAR_01826: Inosine-guanosine kinase (EC 2.7.1.73) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -94 score = 5.14473 sequence = CAGCAAACGTTTGCTA Gene: VP1132: Inosine-guanosine kinase (EC 2.7.1.73) |
*
Vibrio shilonii AK1 Site: position = -93 score = 5.23876 sequence = GCGTAAACGTTTGCTA Gene: VSAK1_00170: Inosine-guanosine kinase (EC 2.7.1.73) |
*
Vibrio splendidus LGP32 Site: position = -92 score = 5.39454 sequence = TAGCAAACGTTTGCTA Gene: VS_2030: Inosine-guanosine kinase (EC 2.7.1.73) |
*
Vibrio fischeri ES114 Site: position = -105 score = 5.47328 sequence = GAGCAAACGTTTGCTA Gene: VF_0911: Inosine-guanosine kinase (EC 2.7.1.73) |
*
Vibrio salmonicida LFI1238 Site: position = -106 score = 5.65327 sequence = TAGCAAACGTTTGCCT Gene: VSAL_I1847: Inosine-guanosine kinase (EC 2.7.1.73) |
Gene: VAS14_17621: Inosine-guanosine kinase (EC 2.7.1.73) |
*
Photobacterium profundum SS9 Site: position = -124 score = 5.17779 sequence = TAGCAAAGGTTTGCGT Gene: PBPRA1026: Inosine-guanosine kinase (EC 2.7.1.73) |
Inosine-guanosine kinase (EC 2.7.1.73) |
| CRON 15. | |||||||||||
| xanP |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -273 score = 6.18396 sequence = AAGCAAACGTTTGCTT Site: position = -216 score = 5.15247 sequence = GCGCAAACGTTTACCT Gene: VC2712: Xanthine permease |
*
Vibrio vulnificus CMCP6 Site: position = -184 score = 5.18737 sequence = TAGCAAACGATTGCTT Gene: VV1_0856: Xanthine permease |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -190 score = 6.18396 sequence = AAGCAAACGTTTGCTT Gene: VIBHAR_00623: Xanthine permease |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -166 score = 5.18737 sequence = TAGCAAACGATTGCTT Gene: VP0156: Xanthine permease |
|
|
*
Vibrio fischeri ES114 Site: position = -188 score = 5.55261 sequence = AAGCAAACGATTGCTT Gene: VF_0116: Xanthine permease |
|
|
*
Photobacterium profundum SS9 Site: position = -187 score = 5.75978 sequence = AAGCAAACGTTTGCTA Gene: PBPRA0186: Xanthine permease |
Xanthine permease |
| CRON 16. | |||||||||||
| purB |
Gene: VC1126: Adenylosuccinate lyase (EC 4.3.2.2) |
*
Vibrio vulnificus CMCP6 Site: position = -89 score = 5.58882 sequence = GCGCAAACGTTTGCGC Gene: VV1_2928: Adenylosuccinate lyase (EC 4.3.2.2) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -23 score = 5.58882 sequence = GCGCAAACGTTTGCGC Gene: VIBHAR_01822: Adenylosuccinate lyase (EC 4.3.2.2) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -89 score = 5.58882 sequence = GCGCAAACGTTTGCGC Gene: VP1128: Adenylosuccinate lyase (EC 4.3.2.2) |
*
Vibrio shilonii AK1 Site: position = -89 score = 5.58882 sequence = GCGCAAACGTTTGCGC Gene: VSAK1_00155: Adenylosuccinate lyase (EC 4.3.2.2) |
*
Vibrio splendidus LGP32 Site: position = -90 score = 5.24398 sequence = ACGCAAACGATTGCGC Gene: VS_2034: Adenylosuccinate lyase (EC 4.3.2.2) |
Gene: VF_1786: Adenylosuccinate lyase (EC 4.3.2.2) |
Gene: VSAL_I2195: Adenylosuccinate lyase (EC 4.3.2.2) |
Gene: VAS14_05453: Adenylosuccinate lyase (EC 4.3.2.2) |
Gene: PBPRA1145: Adenylosuccinate lyase (EC 4.3.2.2) |
Adenylosuccinate lyase (EC 4.3.2.2) |
| CRON 17. | |||||||||||
| fhs |
*
Vibrio cholerae O1 biovar eltor str. N16961 Site: position = -47 score = 5.45416 sequence = GCGCAAACGTTTTCCT Gene: VCA0614: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
*2
Vibrio vulnificus CMCP6 Site: position = -38 score = 5.61726 sequence = CCGCAAACGTTTGCGT Gene: VV20217: Formate--tetrahydrofolate ligase (EC 6.3.4.3) Gene: VV20216: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
*
Vibrio harveyi ATCC BAA-1116 Site: position = -83 score = 5.58882 sequence = GCGCAAACGTTTGCGC Gene: VIBHAR_05943: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
*
Vibrio parahaemolyticus RIMD 2210633 Site: position = -85 score = 5.58882 sequence = GCGCAAACGTTTGCGC Gene: VPA0834: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
*
Vibrio shilonii AK1 Site: position = -46 score = 5.74066 sequence = ACGCAAACGTTTTCCT Gene: VSAK1_15352: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
*
Vibrio splendidus LGP32 Site: position = -48 score = 5.60799 sequence = ACGCAAACGTTTACGT Gene: VS_II0809: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
*
Vibrio fischeri ES114 Site: position = 45 score = 4.97781 sequence = ATGAAAACGATTGCGT Gene: VF_1793: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
*
Vibrio salmonicida LFI1238 Site: position = 45 score = 4.97781 sequence = ATGAAAACGATTGCGT Gene: VSAL_I2184: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
Gene: VAS14_06523: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
*
Photobacterium profundum SS9 Site: position = -96 score = 5.31446 sequence = GCGCAAACGATTGCGT Gene: PBPRA2764: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |