Regulon of PurR in Photobacterium profundum SS9
| Regulator type: | Transcription factor |
| TF locus tag: | PBPRA2109 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Purine metabolism |
| Effector: | Hypoxanthine; Guanine |
| Regulog: | PurR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 18 |
| - Operons | 15 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PurR
- By taxonomy - Vibrionales
- By TF family - LacI
- By effector - Hypoxanthine
- By effector - Guanine
- By pathway - Purine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -96
Score: 5.3 Sequence: GCGCAAACGATTGCGT
Locus tag: PBPRA2764
Name: fhs Funciton: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
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fhs
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Formate--tetrahydrofolate ligase (EC 6.3.4.3)
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Position: -86
Score: 5.8 Sequence: AAGCAAACGTTTGCGC
Locus tag: PBPRA2641
Name: folD Funciton: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
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folD
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Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)
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Position: -91
Score: 5.9 Sequence: ACGAAAACGTTTGCCT
Locus tag: PBPRA0781
Name: guaA Funciton: GMP synthase (EC 6.3.5.2) |
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guaA
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GMP synthase (EC 6.3.5.2)
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Position: -82
Score: 4.9 Sequence: AGCCAAACGATTGCTT
Locus tag: PBPRA0780
Name: guaB Funciton: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) |
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guaB
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Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)
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Position: -143
Score: 6.1 Sequence: AGGCAAACGTTTGCTT
Locus tag: PBPRA1469
Name: purC Funciton: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
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purC
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Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
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Position: -79
Score: 5.6 Sequence: ACGCAAACGTTTCCCT
Locus tag: PBPRA2910
Name: purM Funciton: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Locus tag: PBPRA2911
Name: purN Funciton: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
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purM
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Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
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purN
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Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
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Position: -187
Score: 5.8 Sequence: AAGCAAACGTTTGCTA
Locus tag: PBPRA0186
Name: xanP Funciton: Xanthine permease |
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xanP
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Xanthine permease
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Position: -124
Score: 5.2 Sequence: TAGCAAAGGTTTGCGT
Locus tag: PBPRA1026
Name: gsk Funciton: Inosine-guanosine kinase (EC 2.7.1.73) |
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gsk
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Inosine-guanosine kinase (EC 2.7.1.73)
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Position: -168
Score: 5.9 Sequence: GAGCAAACGTTTGCGT
Locus tag: PBPRA3419
Name: purH Funciton: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Locus tag: PBPRA3420
Name: purD Funciton: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) |
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purH
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IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
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purD
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Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
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Position: -198
Score: 5.6 Sequence: GCGCAAACGGTTGCGT
Locus tag: PBPRA0788
Name: purL Funciton: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
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purL
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Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
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Position: -73
Score: 6.1 Sequence: AGGCAAACGTTTGCGT
Locus tag: PBPRA1685
Name: purT Funciton: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
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purT
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Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
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Position: -126
Score: 5.7 Sequence: AGGGAAACGTTTGCGT
Locus tag: PBPRA2909
Name: upp Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
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upp
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Uracil phosphoribosyltransferase (EC 2.4.2.9)
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Position: -184
Score: 5.4 Sequence: ACGGAATCGTTTGCGT
Locus tag: PBPRA1767
Name: pyrD Funciton: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
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pyrD
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Dihydroorotate dehydrogenase (EC 1.3.3.1)
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Position: -63
Score: 5.8 Sequence: AGGTAAACGTTTGCGT
Locus tag: PBPRA2649
Name: cvpA Funciton: Colicin V production protein
Locus tag: PBPRA2648
Name: purF Funciton: Amidophosphoribosyltransferase (EC 2.4.2.14) |
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cvpA
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Colicin V production protein
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purF
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Amidophosphoribosyltransferase (EC 2.4.2.14)
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Position: -94
Score: 6.1 Sequence: ACGAAAACGTTTGCGT
Locus tag: PBPRA0795
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |