Regulon of PurR in Vibrio fischeri ES114

Properties
Regulator type:	Transcription factor
TF locus tag:	VF_1572
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Purine metabolism
Effector:	Hypoxanthine; Guanine
Regulog:	PurR - Vibrionales
Statistics of regulated genes:
- Genes	19
- Operons	15
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 149 sites [see more]

Member of regulog collections

By trascription factor - PurR
By taxonomy - Vibrionales
By TF family - LacI
By effector - Hypoxanthine
By effector - Guanine
By pathway - Purine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -86 Score: 5.9 Sequence: ACGCAAACGTTTGCTC Locus tag: VF_1770 Name: folD Funciton: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)
	VF_1770	folD	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)
Position: -90 Score: 5.4 Sequence: TAGCAATCGTTTGCTT Locus tag: VF_1498 Name: purC Funciton: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
	VF_1498	purC	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
Position: -86 Score: 5.7 Sequence: ACGCAAACGTTTTCCT Locus tag: VF_2537 Name: purE Funciton: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) Locus tag: VF_2538 Name: purK Funciton: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
	VF_2537	purE	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
	VF_2538	purK	Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Position: -188 Score: 5.6 Sequence: AAGCAAACGATTGCTT Locus tag: VF_0116 Name: xanP Funciton: Xanthine permease
	VF_0116	xanP	Xanthine permease
Position: -105 Score: 5.5 Sequence: GAGCAAACGTTTGCTA Locus tag: VF_0911 Name: gsk Funciton: Inosine-guanosine kinase (EC 2.7.1.73)
	VF_0911	gsk	Inosine-guanosine kinase (EC 2.7.1.73)
Position: -206 Score: 4.4 Sequence: ATGCAATCGATTGCGC Locus tag: VF_2394 Name: purH Funciton: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) Locus tag: VF_2395 Name: purD Funciton: Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
	VF_2394	purH	IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
	VF_2395	purD	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Position: -80 Score: 5.6 Sequence: ACGCAAACGTTTCCCT Locus tag: VF_1928 Name: purM Funciton: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) Locus tag: VF_1929 Name: purN Funciton: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
	VF_1928	purM	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
	VF_1929	purN	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
Position: -182 Score: 5.9 Sequence: ACGCAAACGGTTGCTT Locus tag: VF_0652 Name: purL Funciton: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
	VF_0652	purL	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
Position: -72 Score: 5.8 Sequence: TAGCAAACGTTTGCGT Locus tag: VF_1487 Name: purT Funciton: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
	VF_1487	purT	Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
Position: -143 Score: 5.7 Sequence: AGGGAAACGTTTGCGT Locus tag: VF_1927 Name: upp Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
	VF_1927	upp	Uracil phosphoribosyltransferase (EC 2.4.2.9)
Position: -220 Score: 5.6 Sequence: ACGTAAACGGTTGCGT Locus tag: VF_0778 Name: ushA Funciton: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5)
	VF_0778	ushA	UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5)
Position: -63 Score: 6 Sequence: AAGAAAACGTTTGCGT Locus tag: VF_1692 Name: cvpA Funciton: Colicin V production protein Locus tag: VF_1691 Name: purF Funciton: Amidophosphoribosyltransferase (EC 2.4.2.14)
	VF_1692	cvpA	Colicin V production protein
	VF_1691	purF	Amidophosphoribosyltransferase (EC 2.4.2.14)
Position: 45 Score: 5 Sequence: ATGAAAACGATTGCGT Locus tag: VF_1793 Name: fhs Funciton: Formate--tetrahydrofolate ligase (EC 6.3.4.3)
	VF_1793	fhs	Formate--tetrahydrofolate ligase (EC 6.3.4.3)
Position: -64 Score: 6 Sequence: ACGTAAACGTTTGCGT Locus tag: VF_0695 Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
	VF_0695	glyA	Serine hydroxymethyltransferase (EC 2.1.2.1)
Position: -245 Score: 5.1 Sequence: AGCCAAACGTTTGCTC Locus tag: VF_1285 Name: pyrD Funciton: Dihydroorotate dehydrogenase (EC 1.3.3.1)
	VF_1285	pyrD	Dihydroorotate dehydrogenase (EC 1.3.3.1)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of PurR in Vibrio fischeri ES114

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --