Regulon of PurR in Vibrio salmonicida LFI1238
| Regulator type: | Transcription factor |
| TF locus tag: | VSAL_I1983 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Purine metabolism |
| Effector: | Hypoxanthine; Guanine |
| Regulog: | PurR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 13 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PurR
- By taxonomy - Vibrionales
- By TF family - LacI
- By effector - Hypoxanthine
- By effector - Guanine
- By pathway - Purine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -85
Score: 6.2 Sequence: AAGCAAACGTTTGCGT
Locus tag: VSAL_I2209
Name: folD Funciton: Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) |
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folD
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Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)
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Position: 45
Score: 5 Sequence: ATGAAAACGATTGCGT
Locus tag: VSAL_I2184
Name: fhs Funciton: Formate--tetrahydrofolate ligase (EC 6.3.4.3) |
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fhs
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Formate--tetrahydrofolate ligase (EC 6.3.4.3)
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Position: -92
Score: 5.8 Sequence: AAGCAATCGTTTGCTT
Locus tag: VSAL_I1698
Name: purC Funciton: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) |
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purC
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Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
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Position: -36
Score: 5.7 Sequence: ACGCAAACGTTTTCCT
Locus tag: VSAL_I0081
Name: purE Funciton: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: VSAL_I0080
Name: purK Funciton: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
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purE
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Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
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purK
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Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
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Position: -80
Score: 5.6 Sequence: ACGCAAACGTTTCCCT
Locus tag: VSAL_I2390
Name: purM Funciton: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Locus tag: VSAL_I2391
Name: purN Funciton: Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) |
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purM
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Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
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purN
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Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)
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Position: -246
Score: 4.9 Sequence: AGACAAACGTTTGCAT
Locus tag: VSAL_I1549
Name: pyrD Funciton: Dihydroorotate dehydrogenase (EC 1.3.3.1) |
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pyrD
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Dihydroorotate dehydrogenase (EC 1.3.3.1)
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Position: -106
Score: 5.7 Sequence: TAGCAAACGTTTGCCT
Locus tag: VSAL_I1847
Name: gsk Funciton: Inosine-guanosine kinase (EC 2.7.1.73) |
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gsk
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Inosine-guanosine kinase (EC 2.7.1.73)
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Position: -216
Score: 4.6 Sequence: AAGTGAACGATTGCGT
Locus tag: VSAL_I0800
Name: ushA Funciton: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
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ushA
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UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5)
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Position: -183
Score: 5.9 Sequence: ACGCAAACGGTTGCTT
Locus tag: VSAL_I0750
Name: purL Funciton: Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) |
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purL
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Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
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Position: -74
Score: 5.8 Sequence: AAGCAATCGTTTGCGT
Locus tag: VSAL_I1686
Name: purT Funciton: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) |
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purT
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Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
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Position: -161
Score: 5.7 Sequence: AGGGAAACGTTTGCGT
Locus tag: VSAL_I2389
Name: upp Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) |
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upp
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Uracil phosphoribosyltransferase (EC 2.4.2.9)
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Position: -63
Score: 6 Sequence: AAGAAAACGTTTGCGT
Locus tag: VSAL_I1079
Name: cvpA Funciton: Colicin V production protein
Locus tag: VSAL_I1080
Name: purF Funciton: Amidophosphoribosyltransferase (EC 2.4.2.14) |
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cvpA
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Colicin V production protein
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purF
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Amidophosphoribosyltransferase (EC 2.4.2.14)
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Position: -64
Score: 5.5 Sequence: ACGTAATCGTTTGCGT
Locus tag: VSAL_I0864
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |