Regulog YhcF - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Multidrug resistance; Multidrug efflux
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - GntR/Others
By pathway - Multidrug resistance
By pathway - Multidrug efflux

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	5	1
Bacillus amyloliquefaciens FZB42	5	1
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579	5	1
Bacillus halodurans C-125	3	1
Bacillus clausii KSM-K16	2	1
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2	4	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
yhcE	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -49 score = 6.38113 sequence = GTGTACTATGTTACTCATACAC Gene: BSU09050: Putative integral inner membrane protein	* Bacillus amyloliquefaciens FZB42 Site: position = -46 score = 6.38113 sequence = GTGTACTATGTTACTCATACAC Gene: RBAM_009320: Putative integral inner membrane protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative integral inner membrane protein
yhcF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU09060: Transcriptional regulator, GntR family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_009330: Transcriptional regulator, GntR family	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -43 score = 6.87995 sequence = GTGTATTATTTAACTAGTACAC Gene: BC1356: Transcriptional regulator, GntR family	Bacillus halodurans C-125 Gene: BH0383: Transcriptional regulator, GntR family	Bacillus clausii KSM-K16 Gene: ABC1460: Transcriptional regulator, GntR family	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3930: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family
yhcG	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU09070: ABC-type multidrug transport system, ATPase component	Bacillus amyloliquefaciens FZB42 Gene: RBAM_009340: ABC-type multidrug transport system, ATPase component	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC1357: ABC-type multidrug transport system, ATPase component	Bacillus halodurans C-125 Gene: BH0382: ABC-type multidrug transport system, ATPase component	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3929: ABC-type multidrug transport system, ATPase component	ABC-type multidrug transport system, ATPase component
yhcH	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU09080: ABC transporter, ATP-binding protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_009350: ABC transporter, ATP-binding protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi00969: ABC transporter, ATP-binding protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -44 score = 5.52196 sequence = GTGTACTATTCAACTATAACAC Gene: Pjdr2_3932: ABC transporter, ATP-binding protein	ABC transporter, ATP-binding protein
yhcI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU09090: ABC-type multidrug transport system, permease component	Bacillus amyloliquefaciens FZB42 Gene: RBAM_009360: ABC-type multidrug transport system, permease component	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi00970: ABC-type multidrug transport system, permease component	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3931: ABC-type multidrug transport system, permease component	ABC-type multidrug transport system, permease component
BC1358	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC1358: ABC transporter permease protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	ABC transporter permease protein
bcrA	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0422: Bacitracin transport ATP-binding protein	Bacillus licheniformis DSM 13 Gene: BLi04117: Bacitracin transport ATP-binding protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC1359: Bacitracin transport ATP-binding protein	Bacillus halodurans C-125	* Bacillus clausii KSM-K16 Site: position = -49 score = 6.49133 sequence = GTGTACTATTTAAATAGAACAC Gene: ABC1458: Bacitracin transport ATP-binding protein	Oceanobacillus iheyensis HTE831 Gene: OB1714: Bacitracin transport ATP-binding protein	Paenibacillus sp. JDR-2 Gene: Pjdr2_3970: Bacitracin transport ATP-binding protein	Bacitracin transport ATP-binding protein
bcrB	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0423: Bacitracin transport permease protein	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC1360: Bacitracin transport permease protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1459: Bacitracin transport permease protein	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Bacitracin transport permease protein
BH0384	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = -51 score = 5.96421 sequence = GTGTACTATTTCATTAGCACAA Gene: BH0384: Hypothetical protein	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog YhcF - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --