Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Photorhabdus asymbiotica

Type Regulator Effector Pathway Genes Sites
TF AcrR Rhodamine 6G; Ethidium bromide; Proflavin Multidrug resistance 2 2
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 9 24
TF BirA Biotin Biotin biosynthesis 2 2
TF Crp Cyclic 3',5'-AMP Carbon catabolism 167 482
TF CueR Copper ion, (Cu+) Copper resistance 3 3
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 2 2
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 10 12
TF Fnr Oxygen Energy metabolism; Anaerobic metabolism 47 114
TF FruR Fructose-1-phosphate; Fructose-1,6-diphosphate Central carbohydrate metabolism 12 14
TF FucR L-fuculose-1-phosphate Fucose utilization 2 2
TF Fur Iron ion, (Fe2+) Iron homeostasis 32 127
TF GcvA Glycine Glycine metabolism 1 1
TF GlpR Glycerol 3-phosphate Glycerol utilization 2 3
TF GntR Gluconate Gluconate utilization 1 2
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 3 3
TF HutC cis-Urocanic acid Histidine utilization 2 3
TF HypR Proline; 4-hydroxyproline Proline and 4-hydrohyproline utilization 1 1
TF IclR Pyruvate; Glyoxylate Glyoxylate bypass 1 1
TF IlvY 2-Acetolactate Branched-chain amino acid biosynthesis 2 4
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 2 2
TF LeuO Guanosine 3',5'-bis(diphosphate) 2 6
TF LexA DNA damage SOS response 15 20
TF LsrR 4,5-dihydroxypentan-2,3-dione Quorum sensing; Biofilm formation 1 1
TF LysR LL-2,6-Diaminopimelate Lysine biosynthesis 2 2
TF MetR Homocysteine Methionine biosynthesis 4 7
TF ModE Molybdate Molybdopterin biosynthesis; Molybdenum homeostasis 2 2
TF MprA 2,4-Dinitrophenol; Carbonyl cyanide m-chlorophenylhydrazone Multidrug resistance 2 2
TF NadR NAD NAD biosynthesis 1 1
TF NagC N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 3 5
TF NarP Nitrate; Nitrite Nitrate and nitrite respiration 5 5
TF NhaR Potassium ion Osmotic stress response 1 1
TF NrdR Deoxyribonucleotides Ribonucleotide reductases 4 10
TF NsrR Nitric oxide Nitrosative stress response 4 5
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 4
TF PdhR Pyruvate Pyruvate metabolism 2 2
TF PurR Hypoxanthine; Guanine Purine metabolism 17 19
TF RbsR Ribose Ribose utilization 1 2
TF TreR Trehalose-6-phosphate Trehalose utilization 1 1
TF TrpR Tryptophan Tryptophan biosynthesis 2 2
TF TyrR Tyrosine; Phenylalanine Aromatic amino acid metabolism 3 9
TF UxuR Glucuronate Glucuronate utilization 3 7
TF ZntR Zinc ion, (Zn2+) Zinc resistance 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 2 2
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