Propagation of FabR regulog to Photorhabdus asymbiotica
| Source regulog: | FabR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | Unsaturated acyl-ACP; Unsaturated acyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Photorhabdus asymbiotica |
| Orthologous TF(s) | PAU_04231 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -114
Score: 5.9 Sequence: AGCTAACACCTGTAAGCT
Locus tag: PAU_01099
|
||||
| PAU_01099 | -114 | 5.9 | AGCTAACACCTGTAAGCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lcfH | ||||
| Ortholog function: putative long-chain-fatty-acid--CoA ligase | ||||
| Yersinia pestis KIM | y3641 | -84 | 5.8 | AGTGAACACCTGTACGCT |
| Serratia proteamaculans 568 | Spro_0747 | -82 | 5.5 | AGTAAACACGTGTAAGCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3830 | -60 | 5.6 | AATGTACAGCTGTACGCT |
| Edwardsiella tarda EIB202 | ETAE_0624 | -82 | 5.5 | AGTGCACAGCTGTACGCT |
| Proteus mirabilis HI4320 | PMI2081 | -92 | 6.1 | AGCGAACAGGTGTAAGCT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3671 | -114 | 5.9 | AGCTAACACCTGTAAGCT |
|
Position: 6
Score: 6 Sequence: AGCGTACAGGTGTACTCT
Locus tag: PAU_02747
|
||||
| PAU_02747 | 6 | 6 | AGCGTACAGGTGTACTCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fabA | ||||
| Ortholog function: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0954 | -56 | 6.3 | AGCGTACACGTGTTAGCT |
| Salmonella typhimurium LT2 | STM1067 | -56 | 6.3 | AGCGTACACGTGTTAGCT |
| Citrobacter koseri ATCC BAA-895 | CKO_02114 | -56 | 6.3 | AGCGTACACGTGTTAGCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00983 | -57 | 6 | AGCTTACACGTGTTAGCT |
| Enterobacter sp. 638 | Ent638_1466 | -56 | 6.3 | AGCGTACACGTGTTAGCT |
| Erwinia amylovora ATCC 49946 | EAM_1374 | -57 | 5.8 | TGCTTACAACTGTAAGCT |
| Yersinia pestis KIM | y2740 | -56 | 6.3 | AGCGTACAGCTGTACGCT |
| Serratia proteamaculans 568 | Spro_1751 | -56 | 6.5 | AGCGTACACGTGTAAGCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1748 | -56 | 6.4 | AGCGTACAGGTGTACGCT |
| Edwardsiella tarda EIB202 | ETAE_1264 | -56 | 6.2 | AGCGTACACCTGTTAGCT |
| Proteus mirabilis HI4320 | PMI0782 | -56 | 6.5 | AGCGTACAAGTGTAAGCT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1772 | -57 | 6.1 | AGCGTACAAGTGTACTCT |