Regulog FabR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | Unsaturated acyl-ACP; Unsaturated acyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - FabR
- By TF family - TetR
- By effector - Unsaturated acyl-ACP
- By effector - Unsaturated acyl-CoA
- By pathway - Fatty acid biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 3 | 3 |
| Salmonella typhimurium LT2 | 3 | 3 |
| Citrobacter koseri ATCC BAA-895 | 3 | 3 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 3 | 3 |
| Enterobacter sp. 638 | 3 | 3 |
| Erwinia amylovora ATCC 49946 | 3 | 3 |
| Yersinia pestis KIM | 4 | 4 |
| Serratia proteamaculans 568 | 4 | 4 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 4 | 4 |
| Edwardsiella tarda EIB202 | 4 | 4 |
| Proteus mirabilis HI4320 | 3 | 3 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 3 | 3 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| fabB |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -65 score = 6.44001 sequence = GGCGTACAAGTGTACGCT Gene: b2323: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Salmonella typhimurium LT2 Site: position = -66 score = 6.44001 sequence = GGCGTACAAGTGTACGCT Gene: STM2378: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Citrobacter koseri ATCC BAA-895 Site: position = -65 score = 6.44001 sequence = GGCGTACAAGTGTACGCT Gene: CKO_00462: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -65 score = 6.44001 sequence = GGCGTACAAGTGTACGCT Gene: KPN_02713: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Enterobacter sp. 638 Site: position = -64 score = 6.57187 sequence = AGCGTACAAGTGTACGCT Gene: Ent638_2871: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Erwinia amylovora ATCC 49946 Site: position = -64 score = 6.30567 sequence = GGCGTACAACTGTAAGCT Gene: EAM_2336: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Yersinia pestis KIM Site: position = -67 score = 6.34989 sequence = GGCGTACAACTGTACGCT Gene: y1591: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Serratia proteamaculans 568 Site: position = -66 score = 6.01836 sequence = GGCGTACATCTGTACGCT Gene: Spro_3368: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -68 score = 6.22137 sequence = AGCTTACAACTGTACGCT Gene: ECA3063: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Edwardsiella tarda EIB202 Site: position = -92 score = 6.29904 sequence = GGCGTACAGGTGTACGCT Gene: ETAE_2421: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Proteus mirabilis HI4320 Site: position = -71 score = 6.57187 sequence = AGCGTACAAGTGTACGCT Gene: PMI1795: 3-oxoacyl-[acyl-carrier-protein] synthase I |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -78 score = 6.57187 sequence = AGCGTACAAGTGTACGCT Gene: plu3184: 3-oxoacyl-[acyl-carrier-protein] synthase I |
3-oxoacyl-[acyl-carrier-protein] synthase I |
| CRON 2. | |||||||||||||
| fabA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -56 score = 6.27527 sequence = AGCGTACACGTGTTAGCT Gene: b0954: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Salmonella typhimurium LT2 Site: position = -56 score = 6.27527 sequence = AGCGTACACGTGTTAGCT Gene: STM1067: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Citrobacter koseri ATCC BAA-895 Site: position = -56 score = 6.27527 sequence = AGCGTACACGTGTTAGCT Gene: CKO_02114: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -57 score = 6.0149 sequence = AGCTTACACGTGTTAGCT Gene: KPN_00983: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Enterobacter sp. 638 Site: position = -56 score = 6.27527 sequence = AGCGTACACGTGTTAGCT Gene: Ent638_1466: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Erwinia amylovora ATCC 49946 Site: position = -57 score = 5.78694 sequence = TGCTTACAACTGTAAGCT Gene: EAM_1374: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Yersinia pestis KIM Site: position = -56 score = 6.34077 sequence = AGCGTACAGCTGTACGCT Gene: y2740: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Serratia proteamaculans 568 Site: position = -56 score = 6.472 sequence = AGCGTACACGTGTAAGCT Gene: Spro_1751: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -56 score = 6.4309 sequence = AGCGTACAGGTGTACGCT Gene: ECA1748: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Edwardsiella tarda EIB202 Site: position = -56 score = 6.18514 sequence = AGCGTACACCTGTTAGCT Gene: ETAE_1264: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Proteus mirabilis HI4320 Site: position = -56 score = 6.52766 sequence = AGCGTACAAGTGTAAGCT Gene: PMI0782: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -57 score = 6.12648 sequence = AGCGTACAAGTGTACTCT Gene: plu1772: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase |
| CRON 3. | |||||||||||||
| lcfH |
|
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|
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|
*
Yersinia pestis KIM Site: position = -84 score = 5.84751 sequence = AGTGAACACCTGTACGCT Gene: y3641: putative long-chain-fatty-acid--CoA ligase |
*
Serratia proteamaculans 568 Site: position = -82 score = 5.47329 sequence = AGTAAACACGTGTAAGCT Gene: Spro_0747: putative long-chain-fatty-acid--CoA ligase |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -60 score = 5.58387 sequence = AATGTACAGCTGTACGCT Gene: ECA3830: putative long-chain-fatty-acid--CoA ligase |
*
Edwardsiella tarda EIB202 Site: position = -82 score = 5.46993 sequence = AGTGCACAGCTGTACGCT Gene: ETAE_0624: putative long-chain-fatty-acid--CoA ligase |
*
Proteus mirabilis HI4320 Site: position = -92 score = 6.11962 sequence = AGCGAACAGGTGTAAGCT Gene: PMI2081: putative long-chain-fatty-acid--CoA ligase |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -114 score = 5.85443 sequence = AGCTAACACCTGTAAGCT Gene: plu3671: putative long-chain-fatty-acid--CoA ligase |
putative long-chain-fatty-acid--CoA ligase |
| CRON 4. | |||||||||||||
| hyIII |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -81 score = 5.12884 sequence = AGCTAACAGGTGTTCACT Gene: b2899: COG1272: Predicted membrane protein, hemolysin III homolog |
*
Salmonella typhimurium LT2 Site: position = -82 score = 4.93828 sequence = AGCTAACATGTGTTCACT Gene: STM3049: COG1272: Predicted membrane protein, hemolysin III homolog |
*
Citrobacter koseri ATCC BAA-895 Site: position = -80 score = 5.12884 sequence = AGCTAACAGGTGTTCACT Gene: CKO_04262: COG1272: Predicted membrane protein, hemolysin III homolog |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -80 score = 5.12884 sequence = AGCTAACAGGTGTTCACT Gene: KPN_03327: COG1272: Predicted membrane protein, hemolysin III homolog |
*
Enterobacter sp. 638 Site: position = -86 score = 5.12884 sequence = AGCTAACAGGTGTTCACT Gene: Ent638_3317: COG1272: Predicted membrane protein, hemolysin III homolog |
*
Erwinia amylovora ATCC 49946 Site: position = -108 score = 5.86611 sequence = AGCTTACAAGTGTACTCT Gene: EAM_2786: COG1272: Predicted membrane protein, hemolysin III homolog |
*
Yersinia pestis KIM Site: position = -121 score = 5.853 sequence = AGCGTACAGGTGTACACT Gene: y3285: COG1272: Predicted membrane protein, hemolysin III homolog |
*
Serratia proteamaculans 568 Site: position = -89 score = 5.93832 sequence = AGCGTACACGTGTACACT Gene: Spro_3900: COG1272: Predicted membrane protein, hemolysin III homolog |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -157 score = 5.67795 sequence = AGCTTACACGTGTACACT Gene: ECA0757: COG1272: Predicted membrane protein, hemolysin III homolog |
*
Edwardsiella tarda EIB202 Site: position = -139 score = 5.93832 sequence = AGCGTACACGTGTACACT Gene: ETAE_2937: COG1272: Predicted membrane protein, hemolysin III homolog |
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COG1272: Predicted membrane protein, hemolysin III homolog |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |