Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of UxuR regulog to Photorhabdus asymbiotica

Reference regulog properties
Source regulog: UxuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Photorhabdus asymbiotica
Orthologous TF(s) PAU_00121
Regulated genes 3
Built upon 44 sites [see more]
Predicted regulatory interactions in Photorhabdus asymbiotica
Locus tag Position Score Sequence
Position: -37
Score: 5.7
Sequence: TTTTTGGTTGACCAATTT
Locus tag: PAU_00121
PAU_00121 -37 5.7 TTTTTGGTTGACCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR
Ortholog function: D-glucuronate repressor, GntR family
Escherichia coli str. K-12 substr. MG1655 b4324 -173 5.4 TATTTGGTTGACCAGTTT
Salmonella typhimurium LT2 STM4507 -231 5.9 ATATTGGTAAACCAATAT
-106 5.1 TTGTTGGTTGACCAGTTT
Edwardsiella tarda EIB202 ETAE_1037 -330 5.3 TTTTTGGTTGACCAATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0171 -77 5.7 TTTTTGGTTGACCAATTT
Position: -114
Score: 5.4
Sequence: ATATTGGTCAACCAAATG
Locus tag: PAU_00122
PAU_00122 -114 5.4 ATATTGGTCAACCAAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuP
Ortholog function: Predicted glucuronate TRAP-type transporter, periplasmic component
Photorhabdus luminescens subsp. laumondii TTO1 plu0172 -262 4.4 gAtTTGaTcgACCAAaTa
-114 5.4 ATATTGGTCAACCAAATC
Position: -203
Score: 5.4
Sequence: CATTTGGTTGACCAATAT
Locus tag: PAU_00123
PAU_00123 -203 5.4 CATTTGGTTGACCAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuQ
Ortholog function: Predicted glucuronate TRAP-type transporter, small permease component
Photorhabdus luminescens subsp. laumondii TTO1 plu0173 -201 5.5 GATTTGGTTGACCAATAT
-53 4.5 tAtTTGGTcgAtCAAaTc
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