Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TyrR regulog to Photorhabdus asymbiotica

Reference regulog properties
Source regulog: TyrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: TyrR
Regulation mode: activator (repressor)
Biological process: Aromatic amino acid metabolism
Effector: Tyrosine; Phenylalanine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Photorhabdus asymbiotica
Orthologous TF(s) PAU_01956, PAU_00177
Regulated genes 3
Built upon 106 sites [see more]
Predicted regulatory interactions in Photorhabdus asymbiotica
Locus tag Position Score Sequence
Position: -110
Score: 5.5
Sequence: ACGTAATTATTTATTTACAC
Locus tag: PAU_01547
PAU_01547 -110 5.5 ACGTAATTATTTATTTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tyrP
Ortholog function: Tyrosine-specific transport protein
Proteus mirabilis HI4320 PMI1738 -106 5.3 TTGTAAACAAAACATTACAC
-83 4.7 TCGTAATTAAAATTTGACAG
Photorhabdus luminescens subsp. laumondii TTO1 plu3066 -110 5.7 TTGTAATTATTTATTTACAC
Position: -167
Score: 4.7
Sequence: TTGTATATTTATTTTTAGGC
Position: -134
Score: 5.4
Sequence: TTGTAAACTATTATTTACGT
Locus tag: PAU_03199
PAU_03199 -167 4.7 TTGTATATTTATTTTTAGGC
-134 5.4 TTGTAAACTATTATTTACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroF
Ortholog function: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
Escherichia coli str. K-12 substr. MG1655 b2601 -165 5.4 GTGTAAATTTATCTATACAG
-113 5.4 GTGTAAATAAAAATGTACGA
-90 4 ATGGATTGAAAACTTTACTT
Salmonella typhimurium LT2 STM2670 -164 4.5 GTGTAAAGTTTTTGATACGA
-113 5.3 GTGTAAAGTTTATTTTACGT
-90 4 ATGGATTGAAATCTTTACTT
Citrobacter koseri ATCC BAA-895 CKO_03921 -165 5.3 ATGTAAATTTTTATGTACGA
-112 5.4 ATGTAAAGTAAAATTTACGG
-89 4 GTGGATTGAAATCTTTACCG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02923 -166 4.9 GTGTAAATATTGTTATACGC
-113 5.7 GTGTAAATTAAAATTTACGG
-90 4 ATGGATTGAATTCTTTACTT
Enterobacter sp. 638 Ent638_3080 -165 5.4 CTGTAATTTTATGTTTACGA
-112 5.7 GTGTAAATTAAAATTTACGG
-89 4 TTGGATTGAAATCTTTACTG
Erwinia amylovora ATCC 49946 EAM_2621 -202 5.3 CTGTAATCTTTTATTTACGC
-106 4.1 CTGGTAATTAATGTGTACAC
-73 4 ATGTACTCATTATGGTACAG
Yersinia pestis KIM y0903 -114 5.2 TAGTAATTATTTATTTACAA
-92 4.5 ATGGATTGAAAACTTTACAT
Serratia proteamaculans 568 Spro_0879 -122 5.1 TGGTAATTTTTTATTTACAG
-99 4.6 TCGGATTTAAAACTTTACAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3352 -156 5.2 TGGTAATTTTTTATTTACAC
-133 4.6 GTGGATTTAAATCTTTACGG
Edwardsiella tarda EIB202 ETAE_2837 -129 4.6 GTGTAAAGATGAATGTACGA
-117 4.6 ATGTACGATATTGTTTACAT
-95 4 ATGGATTGAAAAGTTTACTG
Proteus mirabilis HI4320 PMI0387 -244 5.6 GTGTAAAATTAAAATTACAG
-127 5.2 ATGTAAACATATGATTACGA
-85 4.5 ATGGATTGATTTCTTTACAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1262 -140 5.5 TTGTAAACAATAATTTACAG
-98 4.3 TTGGATTGTATTCTTTACGA
© 2009-2020 RegPrecise