Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LeuO regulog to Photorhabdus asymbiotica

Reference regulog properties
Source regulog: LeuO - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process:
Effector: Guanosine 3',5'-bis(diphosphate)
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Photorhabdus asymbiotica
Orthologous TF(s) PAU_01098
Regulated genes 2
Built upon 21 sites [see more]
Predicted regulatory interactions in Photorhabdus asymbiotica
Locus tag Position Score Sequence
Position: -243
Score: 4.4
Sequence: ATTCTCTCTATTTAT
Locus tag: PAU_00706
PAU_00706 -243 4.4 ATTCTCTCTATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cas3
Ortholog function: CRISPR-associated helicase
Photorhabdus luminescens subsp. laumondii TTO1 plu0745 -242 4.4 ATTATCTTTATTTAT
Salmonella typhimurium LT2 STM2944 -165 4.2 ATTTATAATAATTAT
-152 4 ATTCGTGGGGTAAAT
Position: -346
Score: 3.5
Sequence: AATTTTATTATGAAT
Position: -343
Score: 3.5
Sequence: TTTATTATGAATTAT
Position: -223
Score: 4.3
Sequence: ATTGAGATTATATAT
Position: -121
Score: 3.5
Sequence: ATTGAGATAATTGAT
Position: -112
Score: 4.7
Sequence: ATTGATCTCGTTAAT
Locus tag: PAU_01098
PAU_01098 -346 3.5 AATTTTATTATGAAT
-343 3.5 TTTATTATGAATTAT
-223 4.3 ATTGAGATTATATAT
-121 3.5 ATTGAGATAATTGAT
-112 4.7 ATTGATCTCGTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: leuO
Ortholog function: Dual transcriptional regulator LeuO, LysR family
Citrobacter koseri ATCC BAA-895 CKO_03302 -241 3.5 ATTCGCCACGCTTAT
Edwardsiella tarda EIB202 ETAE_0623 -246 4.7 ATTGCCCTTAATTAT
Enterobacter sp. 638 Ent638_0623 -229 4.6 ATTCATTGGATTTAT
Escherichia coli str. K-12 substr. MG1655 b0076 -325 4.1 ATTAATGTTAAGAAT
-243 4.9 ATTCGCGGTAGTTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00081 -291 4.2 ATTTTTATGGATTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3672 -223 4.2 ATTGGAATTATATAT
-112 4.7 ATTGATCTCGTTAAT
Proteus mirabilis HI4320 PMI2082 -289 3.8 ATTTTGTTTTATTAT
Salmonella typhimurium LT2 STM0115 -263 3.9 ATTCACTTGGTGTAT
-240 4.4 ATTCGCCATAGTTAT
Serratia proteamaculans 568 Spro_0746 -400 3.6 ATTCTTGATATCAAT
Yersinia pestis KIM y3642 -413 4.2 ATTATTGGTGATTAT
-210 5 ATTGGCGTTATTAAT
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