Propagation of RbsR regulog to Photorhabdus asymbiotica
| Source regulog: | RbsR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Ribose utilization |
| Effector: | Ribose |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Photorhabdus asymbiotica |
| Orthologous TF(s) | PAU_00056 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -125
Score: 6.6 Sequence: TTAGCGAAACGTTTCGATAA
Position: -46
Score: 6.9 Sequence: TTAGCGAAACGTTTCGCTAA
Locus tag: PAU_00051
|
||||
| PAU_00051 | -125 | 6.6 | TTAGCGAAACGTTTCGATAA | |
| -46 | 6.9 | TTAGCGAAACGTTTCGCTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbsD | ||||
| Ortholog function: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3748 | -31 | 7 | TCAGCGAAACGTTTCGCTGA |
| Salmonella typhimurium LT2 | STM3881 | -111 | 6.2 | CTAGCGAAACGTTTCGACGG |
| -32 | 7.1 | CCAGCGAAACGTTTCGCTAG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00088 | -155 | 7.1 | CCAGCGAAACGTTTCGCTAG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04153 | -116 | 6.2 | CTCGCGAAACGTTTCGATGG |
| -38 | 7.1 | TTAGCGAAACGTTTCGCTAG | ||
| Enterobacter sp. 638 | Ent638_4116 | -32 | 7.1 | TCAGCGAAACGTTTCGCTAG |
| Erwinia amylovora ATCC 49946 | EAM_0015 | -108 | 6.5 | CCAGCAAAACGTTTCGATGG |
| -30 | 6.1 | CTGGCGAAACGTTTCGCTGT | ||
| Serratia proteamaculans 568 | Spro_4901 | -117 | 6.8 | CCAGCGAAACGTTTCGATAG |
| -37 | 6.9 | CAAGCGAAACGTTTCGCTGG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0010 | -109 | 6.8 | TTAGCGAAACGTTTCGATGG |
| -32 | 7.1 | TTAGCGAAACGTTTCGCTGG | ||
| Edwardsiella tarda EIB202 | ETAE_3516 | -31 | 7 | ATAGCGAAACGTTTCGCTGG |
| Proteus mirabilis HI4320 | PMI0093 | -30 | 7 | ACAGCGAAACGTTTCGCTGA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0055 | -110 | 6.2 | TTATCGAAACGTTTCGATAG |
| -32 | 6.9 | ATAGCGAAACGTTTCGCTAA | ||