Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Oceanobacillus iheyensis HTE831

Type Regulator Effector Pathway Genes Sites
TF AraR Arabinose Arabinose utilization 2 6
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 5 16
TF ArsR Arsenite; Cadmium, ion (Cd2+); Silver ion, (Ag+) Arsenic resistance 2 3
TF AseR Arsenite Arsenic resistance 1 1
TF BirA Biotin Biotin biosynthesis 2 2
TF BkdR Branched-chain amino acid degradation 2 2
TF CcpA HPr, phosphocarrier protein Carbon catabolism 40 46
TF CcpC Citrate Citrate metabolism 2 2
TF CcpN Gluconeogenesis 2 2
TF CggR Fructose-1,6-diphosphate Glycolysis 1 1
TF CitT Citrate Citrate utilization 1 5
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 50 88
TF CsoR Copper ion, (Cu+) Copper resistance 1 2
TF CssR CssS, sensor histidine kinase Protein secretion stress response 1 1
TF CtsR Heat shock Heat shock response 2 3
TF CymR O-acetyl-L-serine; CysK, cysteine synthetase Cysteine metabolism 6 6
TF CysL Sulfate; Sulfite; Thiosulfate Sulfite reduction 2 6
TF CzrA Zinc ion, (Zn2+); Silver ion, (Ag+); Nickel ion, (Ni2+); Copper ion, (Cu2+); Cobalt ion, (Co2+); Cadmium, ion (Cd2+) Zinc resistance; Nickel resistance; Copper resistance; Cobalt resistance; Cadmium resistance 1 1
TF DesR Cold shock response 1 1
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 6 7
TF FapR Malonyl-CoA Fatty acid biosynthesis 4 4
TF Fnr Oxygen Anaerobic metabolism 1 1
TF Fur Iron ion, (Fe2+) Iron homeostasis 12 29
TF GamR Glucosamine-6-phosphate Glucosamine utilization 2 2
TF GlcR 1 1
TF GlnR Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 1 1
TF GntR D-gluconate; D-glucono-delta-lactone Gluconate utilization 1 1
TF GudR Glucarate utilization; Galactarate utilization 1 1
TF HisR Histidine Histidine biosynthesis 2 2
TF HrcA Heat shock Heat shock response 3 3
TF LexA DNA damage SOS response 13 18
TF LiaR LiaS, sensor histidine kinase (bacitracin, nisin, ramoplanin, vancomycin) Cell wall-active antibiotics stress response 1 1
TF LicR HPr, phosphocarrier protein; LicB, lichenan-specific enzyme IIB PTS component Beta-glucosides utilization 1 1
TF LutR L-lactate Lactate utilization 1 1
TF MhqR 2-Methylhydroquinone and catechol resistance 3 3
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 1 2
TF MtlR MtlA, mannitol-specific enzyme IICB PTS component; HPr, phosphocarrier protein Mannitol utilization 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 1 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NsrR Nitric oxide Nitrosative stress response 2 2
TF OhrR tert-Butyl hydroperoxide; Diamide; Cumene hydroperoxide; Hydrogen peroxide Peroxide stress response 2 2
TF PerR Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) Oxidative stress response; Peroxide stress response 7 18
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 6 10
TF RbsR Ribose Ribose utilization 1 1
TF Rex NADH Energy metabolism 3 3
TF RmgR Rhamnogalacturonides utilization 5 11
TF SinR SinI, antirepressor protein Biofilm formation 1 2
TF TnrA NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 22 33
TF XylR Xylose Xylose utilization 3 3
TF YodB/CatR Diamide; Quinone Oxidative stress response 1 1
TF YrkD Multidrug resistance 3 4
TF YybA Polyamine homeostasis 1 2
TF YybR/YdeP Multidrug resistance 2 2
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 6 8
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