Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TnrA regulog to Oceanobacillus iheyensis HTE831

Reference regulog properties
Source regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Oceanobacillus iheyensis HTE831
Orthologous TF(s) OB0950, OB1650
Regulated genes 22
Built upon 304 sites [see more]
Predicted regulatory interactions in Oceanobacillus iheyensis HTE831
Locus tag Position Score Sequence
Position: -38
Score: 5.2
Sequence: TGTTAGGAAATCTAACA
Locus tag: OB1212
OB1212 -38 5.2 TGTTAGGAAATCTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgB2
Ortholog function: Nitrogen regulatory protein P-II
Bacillus licheniformis DSM 13 BLi01176 -172 4.3 TGTTATAAAACTTAACG
-59 3.9 TGATAAGAAACATAACA
-37 4.6 CGTAATATAACCTTACA
Oceanobacillus iheyensis HTE831 OB1212 -60 3.4 TGATAATTTACATAACC
-38 5.2 TGTTAGGAAATCTAACA
-31 3.7 TTTTATAAATTATAAAG
Position: -80
Score: 5.1
Sequence: TGTTAGAAATACTAACA
Locus tag: OB1650
OB1650 -80 5.1 TGTTAGAAATACTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU13310 -124 3.9 TGTTAATTTTTCTTCCG
-81 5.5 TGTTAGAAAATATGACA
Bacillus amyloliquefaciens FZB42 RBAM_013130 -124 4.1 TGTCAATTTTTCTGCCG
-81 4.8 CGTCAGAAAACCTGACA
Bacillus pumilus SAFR-032 BPUM_1230 -121 4 TGTCAACTTTCCTTCCA
-80 5.5 TGTTATATTTTCTAACA
Bacillus licheniformis DSM 13 BLi01490 -124 3.8 TGTAAACTTTTCTTCCG
-81 5.6 TGTTAGATTTTCTGACA
Anoxybacillus flavithermus WK1 Aflv_1544 -113 4.9 TGTTACTTTTTATAACA
-82 4.9 TGTTACTTTTTATAACA
-27 5.4 TGTTATAAAATATGACA
Geobacillus kaustophilus HTA426 GK1860 -86 3.9 TGTTAATTTTATTTACA
-33 4.6 CGTTAGAAAATATAACG
Bacillus halodurans C-125 BH1494 -110 5.5 TGTAAGAAAATCTAACA
Bacillus clausii KSM-K16 ABC1760 -99 5.5 TGTTAGATTTTCTTACA
-57 5 TGTGATATATTGTTACA
Oceanobacillus iheyensis HTE831 OB1650 -80 5.1 TGTTAGAAATACTAACA
-57 4.3 TGACATATAAGCTGACG
Paenibacillus sp. JDR-2 Pjdr2_5154 -302 5.7 TGTTAGATAATCTAACA
-41 5 TGTTAGAAAACATTACA
Position: -98
Score: 4
Sequence: TTTACGATTATGTAACA
Locus tag: OB1740
OB1740 -98 4 TTTACGATTATGTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: thyB
Ortholog function: Thymidylate synthase (EC 2.1.1.45)
Anoxybacillus flavithermus WK1 Aflv_1455 -43 5 TGTCATAATAAATGACA
Oceanobacillus iheyensis HTE831 OB1740 -98 4 TTTACGATTATGTAACA
Paenibacillus sp. JDR-2 Pjdr2_2655 -11 4.5 TGATATAAAAAGTGACA
Position: -146
Score: 4.4
Sequence: TGTCGAATTTTGTAACA
Locus tag: OB2264
OB2264 -146 4.4 TGTCGAATTTTGTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: appD
Ortholog function: Oligopeptide ABC transporter (ATP-binding protein)
Bacillus subtilis subsp. subtilis str. 168 BSU11360 -119 4.1 TGTAATAATATACAACT
Bacillus amyloliquefaciens FZB42 RBAM_011360 -101 4.1 TGTAATAATATACAACT
Bacillus clausii KSM-K16 ABC2416 -111 4.2 TGTGAGAAAATCTATTA
Oceanobacillus iheyensis HTE831 OB2264 -146 4.4 TGTCGAATTTTGTAACA
Position: -37
Score: 3.6
Sequence: AGAAAGAATTACTATCA
Locus tag: OB2519
OB2519 -37 3.6 AGAAAGAATTACTATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: degU
Ortholog function: Transcriptional regulator essential for degradative enzyme expression and competence regulation, OmpR family
Bacillus subtilis subsp. subtilis str. 168 BSU35490 -159 3.7 TGGAAGGAACGATGACA
Bacillus pumilus SAFR-032 BPUM_3198 -221 3.4 TGTGAAAACAAATAAAA
-159 3.8 TGGAAGGTAAAATGACC
Oceanobacillus iheyensis HTE831 OB2519 -37 3.6 AGAAAGAATTACTATCA
© 2009-2020 RegPrecise