Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Oceanobacillus iheyensis HTE831

Reference regulog properties
Source regulog: LexA - Bacillales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Firmicutes
Propagated regulon:
Target genome Oceanobacillus iheyensis HTE831
Orthologous TF(s) OB1669
Regulated genes 13
Built upon 206 sites [see more]
Predicted regulatory interactions in Oceanobacillus iheyensis HTE831
Locus tag Position Score Sequence
Position: -31
Score: 4.8
Sequence: CAGAACATACGTTCTC
Locus tag: OB0206
OB0206 -31 4.8 CAGAACATACGTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: xkdA
Ortholog function: Phage-like element PBSX protein xkdA
Bacillus pumilus SAFR-032 BPUM_1157 -30 5.2 TAGAACATACGTTTGT
Bacillus licheniformis DSM 13 BLi01317 -30 4.9 CAGAACATTCGTTCGA
Oceanobacillus iheyensis HTE831 OB0206 -435 4 TCAAATCAATGTTAGT
-31 4.8 CAGAACATACGTTCTC
Position: -34
Score: 4.5
Sequence: ACGAACATATGATCTG
Locus tag: OB1178
OB1178 -34 4.5 ACGAACATATGATCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhjD
Ortholog function: Hypothetical protein
Bacillus pumilus SAFR-032 BPUM_0989 -34 4.5 AAGAACGTGTGTTCTA
Bacillus licheniformis DSM 13 BLi01120 -45 4.6 CAGAACAAATGTTCCT
Bacillus halodurans C-125 BH2963 -40 4.5 ACGAACACATGTTCCT
Oceanobacillus iheyensis HTE831 OB1178 -34 4.5 ACGAACATATGATCTG
Position: -166
Score: 4.7
Sequence: CAGATCATATGTTCGT
Locus tag: OB1179
OB1179 -166 4.7 CAGATCATATGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhjE
Ortholog function: Alkaline phosphatase like protein
Bacillus amyloliquefaciens FZB42 RBAM_010700 -128 4.4 GAGAACCTTTGTTCTT
Bacillus pumilus SAFR-032 BPUM_0990 -128 4.6 TAGAACACACGTTCTT
Bacillus licheniformis DSM 13 BLi01121 -179 4.5 AGGAACATTTGTTCTG
Anoxybacillus flavithermus WK1 Aflv_2232 -174 4.3 GCGAACAAATGATCGA
34 4.3 TAAAACATATGCTTGA
Oceanobacillus iheyensis HTE831 OB1179 -166 4.7 CAGATCATATGTTCGT
Position: -33
Score: 5.2
Sequence: TAGAACATACGTTCTT
Locus tag: OB1361
OB1361 -33 5.2 TAGAACATACGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrX
Ortholog function: Putative UV-damage repair protein
Oceanobacillus iheyensis HTE831 OB1361 -33 5.2 TAGAACATACGTTCTT
Position: -82
Score: 4.4
Sequence: AAGAACATCCATTCGT
Locus tag: OB1624
OB1624 -82 4.4 AAGAACATCCATTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombination protein A
Bacillus subtilis subsp. subtilis str. 168 BSU16940 -87 4.7 CCGAATATGCGTTCGC
Bacillus amyloliquefaciens FZB42 RBAM_016780 -86 4.7 CCGAATATGCGTTCGC
Bacillus pumilus SAFR-032 BPUM_1598 -88 5.2 TCGAATATGTGTTCGT
Bacillus licheniformis DSM 13 BLi01918 -259 4.3 TCGAATTTCAGTTCGC
-86 4.8 TCGAATATGCGTTCGC
Anoxybacillus flavithermus WK1 Aflv_1530 34 4.7 ACGAACATCTATTCGT
Geobacillus kaustophilus HTA426 GK1295 -85 4.4 ACGAATGGACGTTCGT
Bacillus cereus ATCC 14579 BC3779 -85 5.1 TCGAATAAATGTTCGA
Bacillus halodurans C-125 BH2383 -343 4 AAAAATTCACGTTTGT
-121 4.9 GCGAATAAATGTTCGT
Bacillus clausii KSM-K16 ABC2199 -132 5.3 ACGAATAAATGTTCGT
Oceanobacillus iheyensis HTE831 OB1624 -82 4.4 AAGAACATCCATTCGT
Paenibacillus sp. JDR-2 Pjdr2_3379 -297 3.9 GCGAACAATAATTTGT
-84 4.9 ACGAATGTATGTTCGA
Position: -142
Score: 4.8
Sequence: CAGAACAATTGTTCTT
Locus tag: OB1669
OB1669 -142 4.8 CAGAACAATTGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response transcriptional repressor
Bacillus subtilis subsp. subtilis str. 168 BSU17850 -139 4.2 AGGAATGTTTGTTCGC
-102 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus amyloliquefaciens FZB42 RBAM_017650 -140 4.5 AAGAATGTTTGTTCGC
-103 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus pumilus SAFR-032 BPUM_1686 -142 4.6 TAGAATGTGTGTTCGT
-103 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus licheniformis DSM 13 BLi02032 -346 4.1 ATGAATTTGTGTTTGT
-141 4.2 CAGAATGTTTGTTCGG
-103 4.6 ACGAACAAATGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Anoxybacillus flavithermus WK1 Aflv_1506 -110 5.2 TAGAACATTTGTTTGT
-82 4.8 GAGAACTTTTGTTCGT
-53 5.2 TCGAACTTATGTTTGT
Geobacillus kaustophilus HTA426 GK1328 -136 4.5 TAGAATGTTTGTTCGC
-103 4.9 AGGAACATTTGTTTGT
-74 5.1 TCGAACCTATGTTTGT
Bacillus cereus ATCC 14579 BC3690 -70 5.2 TCGAACTTATGTTTGT
Bacillus halodurans C-125 BH2356 -107 4.7 AAGAACACTTGTTTGT
-78 4.9 TAGAACTTATGTTTGC
Bacillus clausii KSM-K16 ABC2167 -107 4.6 AGGAACAACTGTTCGT
-76 4.9 TAGAACTTATGTTTGC
Oceanobacillus iheyensis HTE831 OB1669 -142 4.8 CAGAACAATTGTTCTT
-107 4.6 CCGAACATATGATCTT
-78 4.2 TAGAACGAGTGTTTGC
Paenibacillus sp. JDR-2 Pjdr2_2621 -157 4.4 CCGAACGTTTGTTCTG
-118 5.1 ACGAACAAATGTTTGC
-72 5.1 AAGAACTTATGTTTGT
Position: -198
Score: 4.6
Sequence: AAGATCATATGTTCGG
Position: -163
Score: 4.7
Sequence: AAGAACAATTGTTCTG
Locus tag: OB1670
OB1670 -198 4.6 AAGATCATATGTTCGG
-163 4.7 AAGAACAATTGTTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yneB
Ortholog function: Site-specific recombinase, DNA invertase
Bacillus subtilis subsp. subtilis str. 168 BSU17870 -428 5.1 ACAAACATAGGTTCGA
-399 4.4 AGAAACGTTTGTTCGT
Bacillus amyloliquefaciens FZB42 RBAM_017670 -426 5.1 ACAAACATAGGTTCGA
-396 4.4 AGAAACGTTTGTTCGT
-359 4.1 GCGAACAAACATTCTT
Bacillus pumilus SAFR-032 BPUM_1688 -431 5.1 ACAAACATAGGTTCGA
-401 4.4 AGAAACGTTTGTTCGT
-362 4 ACGAACACACATTCTA
Bacillus licheniformis DSM 13 BLi02034 -425 5.1 ACAAACATAGGTTCGA
-395 4.9 AGAAACATTTGTTCGT
-357 4 CCGAACAAACATTCTG
Anoxybacillus flavithermus WK1 Aflv_1504 -404 5.2 ACAAACATAAGTTCGA
-375 4.9 ACGAACAAAAGTTCTC
-347 5 ACAAACAAATGTTCTA
Geobacillus kaustophilus HTA426 GK1330 -419 5.1 ACAAACATAGGTTCGA
-390 4.6 ACAAACAAATGTTCCT
-357 4 GCGAACAAACATTCTA
Bacillus cereus ATCC 14579 BC3689 -75 5.2 ACAAACATAAGTTCGA
Bacillus halodurans C-125 BH2354 -317 4.6 GCAAACATAAGTTCTA
-288 4.8 ACAAACAAGTGTTCTT
Bacillus clausii KSM-K16 ABC2166 -443 4.4 ACGAACAGTTGTTCCT
-414 4 CAGAACAAACATTCTC
Oceanobacillus iheyensis HTE831 OB1670 -227 3.9 GCAAACACTCGTTCTA
-198 4.6 AAGATCATATGTTCGG
-163 4.7 AAGAACAATTGTTCTG
Position: -57
Score: 4.6
Sequence: AAGAACAGTTGTTCTA
Locus tag: OB1693
OB1693 -57 4.6 AAGAACAGTTGTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: parE
Ortholog function: Topoisomerase IV subunit B (EC 5.99.1.-)
Bacillus subtilis subsp. subtilis str. 168 BSU18090 -220 4.9 ACAAACATACGTTCTC
Bacillus amyloliquefaciens FZB42 RBAM_017900 -243 4.3 GCGAACTCATGTTCTT
Bacillus pumilus SAFR-032 BPUM_1709 -246 4.8 TAGAACATTTGTTCTG
Anoxybacillus flavithermus WK1 Aflv_1444 -30 4.7 AGAAACAAATGTTCTT
Geobacillus kaustophilus HTA426 GK1751 -40 4.1 AGAAACAGGTGTTCTT
Bacillus cereus ATCC 14579 BC3597 -44 4.6 AGAAACATATGTTCTG
Bacillus halodurans C-125 BH2140 -72 4.9 CCGAACATGCGTTTGT
Bacillus clausii KSM-K16 ABC1989 -64 4.5 CAGAACAAACATTCGT
Oceanobacillus iheyensis HTE831 OB1693 -57 4.6 AAGAACAGTTGTTCTA
Paenibacillus sp. JDR-2 Pjdr2_2492 -172 4 GCGAATTTATGTTATT
Position: -286
Score: 4.4
Sequence: AAGAACAAATATTTGC
Locus tag: OB1905
OB1905 -286 4.4 AAGAACAAATATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqhH
Ortholog function: Uncharacterized ATP-dependent helicase YqhH, SNF2 family
Bacillus amyloliquefaciens FZB42 RBAM_022900 -243 4.1 TCGAGCAAGAGTTCTT
Anoxybacillus flavithermus WK1 Aflv_0914 -274 4.6 TCAAACAAGAGTTCTT
Oceanobacillus iheyensis HTE831 OB1905 -287 4.4 AaGAACAaATaTTtGc
Position: -63
Score: 4.1
Sequence: CCGTATACATGTTCGT
Locus tag: OB2177
OB2177 -63 4.1 CCGTATACATGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnaE
Ortholog function: DNA polymerase III alpha subunit (EC 2.7.7.7)
Bacillus subtilis subsp. subtilis str. 168 BSU29230 -76 4.5 AAGAACATTTGTTTCT
Bacillus amyloliquefaciens FZB42 RBAM_026280 -69 4.5 AAGAACATTTGTTTCT
Bacillus pumilus SAFR-032 BPUM_2566 -73 4.5 AAGAACATTTGTTTCT
Bacillus licheniformis DSM 13 BLi03072 -74 4.5 AAGAACATTTGTTTCT
Oceanobacillus iheyensis HTE831 OB2177 -161 4.1 GCGAAAAAACGTTCTT
-63 4.1 CCGTATACATGTTCGT
Position: -70
Score: 4.7
Sequence: ACGAATACTTGTTCGT
Locus tag: OB2488
OB2488 -70 4.7 ACGAATACTTGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrB
Ortholog function: Excinuclease ABC subunit B
Bacillus subtilis subsp. subtilis str. 168 BSU35170 -93 4.9 CCGAACTTTAGTTCGT
Bacillus amyloliquefaciens FZB42 RBAM_032310 -90 5 TCGAACTTTAGTTCGT
Bacillus pumilus SAFR-032 BPUM_3148 -82 4.9 CCGAACTTTAGTTCGT
Bacillus licheniformis DSM 13 BLi03759 -81 4.9 CCGAACTTTAGTTCGT
Anoxybacillus flavithermus WK1 Aflv_2547 -81 5.1 TAGAATATTTGTTCGT
Geobacillus kaustophilus HTA426 GK3086 -85 4.8 ACGAATATGAGTTCGC
Bacillus cereus ATCC 14579 BC5168 -86 4.9 CCGAATATCTGTTCGT
Bacillus halodurans C-125 BH3595 -91 4.9 CAAAACAAACGTTCGT
Bacillus clausii KSM-K16 ABC3059 -337 4.4 TAGTACGTATGTTCGT
Oceanobacillus iheyensis HTE831 OB2488 -70 4.7 ACGAATACTTGTTCGT
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