Regulog LexA - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 44 | 28 |
| Bacillus amyloliquefaciens FZB42 | 36 | 21 |
| Bacillus pumilus SAFR-032 | 36 | 19 |
| Bacillus licheniformis DSM 13 | 31 | 18 |
| Anoxybacillus flavithermus WK1 | 26 | 11 |
| Geobacillus kaustophilus HTA426 | 20 | 9 |
| Bacillus cereus ATCC 14579 | 13 | 8 |
| Bacillus halodurans C-125 | 16 | 10 |
| Bacillus clausii KSM-K16 | 11 | 8 |
| Oceanobacillus iheyensis HTE831 | 24 | 11 |
| Paenibacillus sp. JDR-2 | 12 | 9 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| yqjW |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -29 score = 4.92244 sequence = GCGAACATAAGTTCTT Site: position = -57 score = 4.70699 sequence = ACGAACATACTTTCGC Gene: BSU23710: DNA polymerase IV (EC 2.7.7.7) |
*
Bacillus amyloliquefaciens FZB42 Site: position = -28 score = 4.34582 sequence = CAGAACAAATGTTCCC Gene: RBAM_021830: DNA polymerase IV (EC 2.7.7.7) |
*
Bacillus pumilus SAFR-032 Site: position = -29 score = 4.92293 sequence = CAGAACATACGTTCTA Gene: BPUM_2102: DNA polymerase IV (EC 2.7.7.7) |
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Bacillus halodurans C-125 Site: position = -30 score = 5.02562 sequence = CAGAACAAATGTTCTT Site: position = -57 score = 4.01082 sequence = ACGAACAAATATTCAC Gene: BH2741: DNA polymerase IV (EC 2.7.7.7) |
*
Bacillus clausii KSM-K16 Site: position = -85 score = 4.06543 sequence = CCGAACGTCTATTCGT Gene: ABC3826: DNA polymerase IV (EC 2.7.7.7) |
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*
Paenibacillus sp. JDR-2 Site: position = -37 score = 4.70699 sequence = ACGAACATACTTTCGC Site: position = -66 score = 4.22977 sequence = GCGAACATACATTCGG Gene: Pjdr2_3737: DNA polymerase IV (EC 2.7.7.7) |
DNA polymerase IV (EC 2.7.7.7) |
| CRON 2. | ||||||||||||
| yqhH |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -268 score = 4.06351 sequence = TCGAGCAAGAGTTCTT Gene: BSU24580: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
*
Bacillus amyloliquefaciens FZB42 Site: position = -243 score = 4.06351 sequence = TCGAGCAAGAGTTCTT Gene: RBAM_022900: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
Gene: BPUM_2190: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
Gene: BLi02633: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
*
Anoxybacillus flavithermus WK1 Site: position = -274 score = 4.59184 sequence = TCAAACAAGAGTTCTT Gene: Aflv_0914: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
Gene: GK2426: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
Gene: BC4227: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
2
Bacillus halodurans C-125 Gene: BH0969: Uncharacterized ATP-dependent helicase YqhH, SNF2 family Gene: BH2817: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
Gene: ABC2496: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
*
Oceanobacillus iheyensis HTE831 Site: position = -287 score = 4.36305 sequence = AaGAACAaATaTTtGc Gene: OB1905: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
Gene: Pjdr2_3991: Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
Uncharacterized ATP-dependent helicase YqhH, SNF2 family |
| yqhG |
Gene: BSU24590: Hypothetical protein |
Gene: RBAM_022910: Hypothetical protein |
Gene: BPUM_2191: Hypothetical protein |
Gene: BLi02634: Hypothetical protein |
Gene: Aflv_0913: Hypothetical protein |
Gene: GK2427: Hypothetical protein |
Gene: BC4228: Hypothetical protein |
Gene: BH2818: Hypothetical protein |
Gene: ABC2497: Hypothetical protein |
Gene: OB1906: Hypothetical protein |
Gene: Pjdr2_3992: Hypothetical protein |
Hypothetical protein |
| CRON 3. | ||||||||||||
| ypuD |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -171 score = 4.65581 sequence = CAGAACATAAATTCGT Gene: BSU23300: Hypothetical protein |
*
Bacillus amyloliquefaciens FZB42 Site: position = -177 score = 4.65581 sequence = CAGAACATAAATTCGT Gene: RBAM_021430: Hypothetical protein |
*
Bacillus pumilus SAFR-032 Site: position = -169 score = 3.99642 sequence = AAGAACGCATATTCGT Gene: BPUM_2062: Hypothetical protein |
*
Bacillus licheniformis DSM 13 Site: position = -177 score = 3.99224 sequence = CAGAATGTACATTCGT Gene: BLi02476: Hypothetical protein |
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Hypothetical protein |
| CRON 4. | ||||||||||||
| yozL |
*2
Bacillus subtilis subsp. subtilis str. 168 Site: position = -83 score = 4.07829 sequence = AGGAACGTTTGTTCTG Site: position = -113 score = 4.70004 sequence = TCGAACTTTTGTTCTG Gene: BSU18950: Hypothetical protein Site: position = -48 score = 4.40823 sequence = AAGAACGTTTGTTCTG Site: position = -78 score = 4.70004 sequence = TCGAACTTTTGTTCTG Gene: BSU21510: Hypothetical protein |
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Bacillus licheniformis DSM 13 Site: position = -349 score = 4.8091 sequence = AAAAACATTAGTTTGT Gene: BLi00626: Hypothetical protein |
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Hypothetical protein |
| CRON 5. | ||||||||||||
| yneB |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -399 score = 4.41726 sequence = AGAAACGTTTGTTCGT Site: position = -428 score = 5.08224 sequence = ACAAACATAGGTTCGA Gene: BSU17870: Site-specific recombinase, DNA invertase |
*
Bacillus amyloliquefaciens FZB42 Site: position = -359 score = 4.13148 sequence = GCGAACAAACATTCTT Site: position = -396 score = 4.41726 sequence = AGAAACGTTTGTTCGT Site: position = -426 score = 5.08224 sequence = ACAAACATAGGTTCGA Gene: RBAM_017670: Site-specific recombinase, DNA invertase |
*
Bacillus pumilus SAFR-032 Site: position = -362 score = 4.04826 sequence = ACGAACACACATTCTA Site: position = -401 score = 4.41726 sequence = AGAAACGTTTGTTCGT Site: position = -431 score = 5.08224 sequence = ACAAACATAGGTTCGA Gene: BPUM_1688: Site-specific recombinase, DNA invertase |
*
Bacillus licheniformis DSM 13 Site: position = -357 score = 4.04074 sequence = CCGAACAAACATTCTG Site: position = -395 score = 4.88182 sequence = AGAAACATTTGTTCGT Site: position = -425 score = 5.08224 sequence = ACAAACATAGGTTCGA Gene: BLi02034: Site-specific recombinase, DNA invertase |
*
Anoxybacillus flavithermus WK1 Site: position = -347 score = 4.95739 sequence = ACAAACAAATGTTCTA Site: position = -375 score = 4.85554 sequence = ACGAACAAAAGTTCTC Site: position = -404 score = 5.17374 sequence = ACAAACATAAGTTCGA Gene: Aflv_1504: Site-specific recombinase, DNA invertase |
*
Geobacillus kaustophilus HTA426 Site: position = -357 score = 3.99384 sequence = GCGAACAAACATTCTA Site: position = -390 score = 4.63234 sequence = ACAAACAAATGTTCCT Site: position = -419 score = 5.08224 sequence = ACAAACATAGGTTCGA Gene: GK1330: Site-specific recombinase, DNA invertase |
*
Bacillus cereus ATCC 14579 Site: position = -75 score = 5.17374 sequence = ACAAACATAAGTTCGA Gene: BC3689: Site-specific recombinase, DNA invertase |
*
Bacillus halodurans C-125 Site: position = -288 score = 4.8289 sequence = ACAAACAAGTGTTCTT Site: position = -317 score = 4.60306 sequence = GCAAACATAAGTTCTA Gene: BH2354: Site-specific recombinase, DNA invertase |
*
Bacillus clausii KSM-K16 Site: position = -414 score = 4.03536 sequence = CAGAACAAACATTCTC Site: position = -443 score = 4.3737 sequence = ACGAACAGTTGTTCCT Gene: ABC2166: Site-specific recombinase, DNA invertase |
*
Oceanobacillus iheyensis HTE831 Site: position = -163 score = 4.65085 sequence = AAGAACAATTGTTCTG Site: position = -198 score = 4.55455 sequence = AAGATCATATGTTCGG Site: position = -227 score = 3.88724 sequence = GCAAACACTCGTTCTA Gene: OB1670: Site-specific recombinase, DNA invertase |
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Site-specific recombinase, DNA invertase |
| ynzC |
Gene: BSU17880: Hypothetical protein |
Gene: RBAM_017680: Hypothetical protein |
Gene: BPUM_1689: Hypothetical protein |
Gene: BLi02035: Hypothetical protein |
Gene: Aflv_1503: Hypothetical protein |
Gene: GK1331: Hypothetical protein |
Gene: BC3688: Hypothetical protein |
Gene: BH2353: Hypothetical protein |
Gene: ABC2165: Hypothetical protein |
Gene: OB1671: Hypothetical protein |
Gene: Pjdr2_2623: Hypothetical protein |
Hypothetical protein |
| tkt |
Gene: BSU17890: Transketolase (EC 2.2.1.1) |
Gene: RBAM_017690: Transketolase (EC 2.2.1.1) |
Gene: BPUM_1690: Transketolase (EC 2.2.1.1) |
Gene: BLi02036: Transketolase (EC 2.2.1.1) |
Gene: Aflv_1502: Transketolase (EC 2.2.1.1) |
Gene: GK1332: Transketolase (EC 2.2.1.1) |
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Gene: BH2352: Transketolase (EC 2.2.1.1) |
Gene: ABC2164: Transketolase (EC 2.2.1.1) |
Gene: OB1672: Transketolase (EC 2.2.1.1) |
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Transketolase (EC 2.2.1.1) |
| yneE |
Gene: BSU17900: Hypothetical protein |
Gene: RBAM_017700: Hypothetical protein |
Gene: BPUM_1691: Hypothetical protein |
Gene: BLi02037: Hypothetical protein |
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Gene: GK1333: Hypothetical protein |
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Gene: ABC2163: Hypothetical protein |
Gene: OB1673: Hypothetical protein |
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Hypothetical protein |
| OB1674 |
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Gene: OB1674: Hypothetical protein |
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Hypothetical protein |
| OB1675 |
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Gene: OB1675: Methyl-accepting chemotaxis protein |
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Methyl-accepting chemotaxis protein |
| yneF |
Gene: BSU17910: Hypothetical protein |
Gene: RBAM_017710: Hypothetical protein |
Gene: BPUM_1692: Hypothetical protein |
Gene: BLi02038: Hypothetical protein |
Gene: Aflv_1501: Hypothetical protein |
Gene: GK1334: Hypothetical protein |
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Gene: ABC2162: Hypothetical protein |
Gene: OB1676: Hypothetical protein |
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Hypothetical protein |
| Pjdr2_2622 |
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*
Paenibacillus sp. JDR-2 Site: position = -28 score = 4.71499 sequence = CAGAACAAACGTTCGG Site: position = -67 score = 4.95007 sequence = GCAAACATTTGTTCGT Site: position = -97 score = 4.76189 sequence = AAAAACAAAAGTTCGC Site: position = -113 score = 5.11284 sequence = ACAAACATAAGTTCTT Site: position = -129 score = 4.24033 sequence = TAGAACCGGAGTTCGT Gene: Pjdr2_2622: Peptidoglycan-binding protein |
Peptidoglycan-binding protein |
| CRON 6. | ||||||||||||
| ykvR |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -125 score = 5.03414 sequence = ACGAACGTATGTTTGT Gene: BSU13800: Hypothetical protein |
*
Bacillus amyloliquefaciens FZB42 Site: position = -111 score = 4.22161 sequence = GGGAACGTATGTTTGT Gene: RBAM_013560: Hypothetical protein |
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Gene: OB0456: Hypothetical protein |
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Hypothetical protein |
| CRON 7. | ||||||||||||
| ybaK |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -140 score = 4.59158 sequence = CAGAACATTTGTTCCT Gene: BSU01520: Putative alkylated deoxynucleotide triphosphohydrolase |
Gene: RBAM_001780: Putative alkylated deoxynucleotide triphosphohydrolase |
Gene: BPUM_0143: Putative alkylated deoxynucleotide triphosphohydrolase |
Gene: BLi00170: Putative alkylated deoxynucleotide triphosphohydrolase |
Gene: Aflv_0140: Putative alkylated deoxynucleotide triphosphohydrolase |
Gene: GK0141: Putative alkylated deoxynucleotide triphosphohydrolase |
Gene: BC0166: Putative alkylated deoxynucleotide triphosphohydrolase |
Gene: BH0238: Putative alkylated deoxynucleotide triphosphohydrolase |
Gene: ABC0191: Putative alkylated deoxynucleotide triphosphohydrolase |
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Putative alkylated deoxynucleotide triphosphohydrolase |
| cwlD |
Gene: BSU01530: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: RBAM_001790: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: BPUM_0144: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: BLi00171: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: Aflv_0141: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: GK0142: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: BC0167: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: BH0239: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: ABC0192: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: OB0195: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Gene: Pjdr2_5645: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
| CRON 8. | ||||||||||||
| xkdA |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -30 score = 4.89953 sequence = CAGAACAAACGTTCGA Gene: BSU12500: Phage-like element PBSX protein xkdA |
*
Bacillus amyloliquefaciens FZB42 Site: position = -30 score = 5.44916 sequence = AAGAACATATGTTCGA Gene: RBAM_012500: Phage-like element PBSX protein xkdA |
*
Bacillus pumilus SAFR-032 Site: position = -30 score = 5.16833 sequence = TAGAACATACGTTTGT Gene: BPUM_1157: Phage-like element PBSX protein xkdA |
*
Bacillus licheniformis DSM 13 Site: position = -30 score = 4.92817 sequence = CAGAACATTCGTTCGA Gene: BLi01317: Phage-like element PBSX protein xkdA |
*
Anoxybacillus flavithermus WK1 Site: position = -54 score = 5.38826 sequence = AAGAACATATGTTTGT Gene: Aflv_0776: Phage-like element PBSX protein xkdA |
*
Geobacillus kaustophilus HTA426 Site: position = -39 score = 4.38591 sequence = AAGAACACATGTTCCT Gene: GK0489: Phage-like element PBSX protein xkdA |
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*
Oceanobacillus iheyensis HTE831 Site: position = -31 score = 4.84345 sequence = CAGAACATACGTTCTC Site: position = -435 score = 4.00901 sequence = TCAAATCAATGTTAGT Gene: OB0206: Phage-like element PBSX protein xkdA |
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Phage-like element PBSX protein xkdA |
| CRON 9. | ||||||||||||
| vsr |
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Gene: OB3341: DNA mismatch endonuclease |
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Paenibacillus sp. JDR-2 Site: position = -35 score = 5.17115 sequence = AAGAACATATGTTCTC Gene: Pjdr2_4666: DNA mismatch endonuclease |
DNA mismatch endonuclease |
| CRON 10. | ||||||||||||
| uvrC |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -59 score = 4.99613 sequence = AAAAACAAACGTTCGT Gene: BSU28490: Excinuclease ABC subunit C |
*
Bacillus amyloliquefaciens FZB42 Site: position = -62 score = 5.18312 sequence = AAAAACAAATGTTCGT Gene: RBAM_025550: Excinuclease ABC subunit C |
*
Bacillus pumilus SAFR-032 Site: position = -62 score = 5.15018 sequence = TAAAACAAATGTTCGT Gene: BPUM_2506: Excinuclease ABC subunit C |
Gene: BLi02997: Excinuclease ABC subunit C |
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Gene: GK2675: Excinuclease ABC subunit C |
*
Bacillus cereus ATCC 14579 Site: position = -83 score = 4.13884 sequence = AAGAACGTATGTTGGG Gene: BC4520: Excinuclease ABC subunit C |
Gene: BH3097: Excinuclease ABC subunit C |
Gene: ABC2667: Excinuclease ABC subunit C |
Gene: OB2116: Excinuclease ABC subunit C |
*
Paenibacillus sp. JDR-2 Site: position = -329 score = 4.34366 sequence = CGAAACATGCGTTCGA Gene: Pjdr2_4818: Excinuclease ABC subunit C |
Excinuclease ABC subunit C |
| CRON 11. | ||||||||||||
| uvrB |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -93 score = 4.90887 sequence = CCGAACTTTAGTTCGT Gene: BSU35170: Excinuclease ABC subunit B |
*
Bacillus amyloliquefaciens FZB42 Site: position = -90 score = 5.01663 sequence = TCGAACTTTAGTTCGT Gene: RBAM_032310: Excinuclease ABC subunit B |
*
Bacillus pumilus SAFR-032 Site: position = -82 score = 4.90887 sequence = CCGAACTTTAGTTCGT Gene: BPUM_3148: Excinuclease ABC subunit B |
*
Bacillus licheniformis DSM 13 Site: position = -81 score = 4.90887 sequence = CCGAACTTTAGTTCGT Gene: BLi03759: Excinuclease ABC subunit B |
*
Anoxybacillus flavithermus WK1 Site: position = -81 score = 5.14441 sequence = TAGAATATTTGTTCGT Gene: Aflv_2547: Excinuclease ABC subunit B |
*
Geobacillus kaustophilus HTA426 Site: position = -85 score = 4.79373 sequence = ACGAATATGAGTTCGC Gene: GK3086: Excinuclease ABC subunit B |
*
Bacillus cereus ATCC 14579 Site: position = -86 score = 4.9 sequence = CCGAATATCTGTTCGT Gene: BC5168: Excinuclease ABC subunit B |
*
Bacillus halodurans C-125 Site: position = -91 score = 4.85543 sequence = CAAAACAAACGTTCGT Gene: BH3595: Excinuclease ABC subunit B |
*
Bacillus clausii KSM-K16 Site: position = -337 score = 4.37923 sequence = TAGTACGTATGTTCGT Gene: ABC3059: Excinuclease ABC subunit B |
*
Oceanobacillus iheyensis HTE831 Site: position = -70 score = 4.74814 sequence = ACGAATACTTGTTCGT Gene: OB2488: Excinuclease ABC subunit B |
Gene: Pjdr2_5729: Excinuclease ABC subunit B |
Excinuclease ABC subunit B |
| uvrA |
Gene: BSU35160: Excinuclease ABC subunit A |
Gene: RBAM_032300: Excinuclease ABC subunit A |
Gene: BPUM_3147: Excinuclease ABC subunit A |
Gene: BLi03758: Excinuclease ABC subunit A |
Gene: Aflv_2546: Excinuclease ABC subunit A |
Gene: GK3085: Excinuclease ABC subunit A |
Gene: BC5167: Excinuclease ABC subunit A |
Gene: BH3594: Excinuclease ABC subunit A |
Gene: ABC3058: Excinuclease ABC subunit A |
Gene: OB2487: Excinuclease ABC subunit A |
Gene: Pjdr2_5728: Excinuclease ABC subunit A |
Excinuclease ABC subunit A |
| CRON 12. | ||||||||||||
| tagC |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -69 score = 4.67633 sequence = CCGAACGTATGTTTGC Site: position = -99 score = 4.75949 sequence = CAGAACAAGTGTTCTT Gene: BSU35770: Polyglycerol phosphate assembly and export |
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Polyglycerol phosphate assembly and export |
| CRON 13. | ||||||||||||
| sda |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -127 score = 4.36776 sequence = CAGAACGATTGTTCTT Gene: BSU25690: Sporulation inhibitor sda |
*
Bacillus amyloliquefaciens FZB42 Site: position = -144 score = 4.36776 sequence = CAGAACGATTGTTCTT Gene: RBAM_023990: Sporulation inhibitor sda |
*
Bacillus pumilus SAFR-032 Site: position = -145 score = 4.36776 sequence = CAGAACGATTGTTCTT Gene: BPUM_2304: Sporulation inhibitor sda |
*
Bacillus licheniformis DSM 13 Site: position = -145 score = 4.15065 sequence = CAGAACGATTGTTCTC Gene: BLi02762: Sporulation inhibitor sda |
*
Anoxybacillus flavithermus WK1 Site: position = -57 score = 4.36776 sequence = CAGAACGATTGTTCTT Site: position = -181 score = 3.97772 sequence = AAAAACCGACGTTTTT Gene: Aflv_0810: Sporulation inhibitor sda |
*
Geobacillus kaustophilus HTA426 Site: position = -105 score = 3.90356 sequence = CAGAACGGTTGTTCTC Gene: GK2527: Sporulation inhibitor sda |
Gene: BC4334: Sporulation inhibitor sda |
4
Bacillus halodurans C-125 Gene: BH1452: Sporulation inhibitor sda Gene: BH1305: Sporulation inhibitor sda Gene: BH3312: Sporulation inhibitor sda Gene: BH1321: Sporulation inhibitor sda |
Gene: ABC1162: Sporulation inhibitor sda |
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Gene: Pjdr2_4837: Sporulation inhibitor sda |
Sporulation inhibitor sda |
| CRON 14. | ||||||||||||
| bofC |
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*
Anoxybacillus flavithermus WK1 Site: position = -282 score = 4.06415 sequence = CAGAAGATTCGTTTGA Gene: Aflv_0710: forespore regulator of the sigma-K checkpoint |
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forespore regulator of the sigma-K checkpoint |
| ruvA |
Gene: BSU27740: holliday junction DNA helicase, subunit A |
Gene: RBAM_024850: holliday junction DNA helicase, subunit A |
Gene: BPUM_2416: holliday junction DNA helicase, subunit A |
Gene: BLi02901: holliday junction DNA helicase, subunit A |
Gene: Aflv_0711: holliday junction DNA helicase, subunit A |
Gene: GK2592: holliday junction DNA helicase, subunit A |
*
Bacillus cereus ATCC 14579 Site: position = -85 score = 4.03796 sequence = GAGAACATTTGTTGGG Gene: BC4415: holliday junction DNA helicase, subunit A |
Gene: BH1224: holliday junction DNA helicase, subunit A |
*
Bacillus clausii KSM-K16 Site: position = -43 score = 4.41992 sequence = AGAAATAAATGTTCGC Gene: ABC1554: holliday junction DNA helicase, subunit A |
Gene: OB2037: holliday junction DNA helicase, subunit A |
Gene: Pjdr2_4401: holliday junction DNA helicase, subunit A |
holliday junction DNA helicase, subunit A |
| ruvB |
Gene: BSU27730: holliday junction DNA helicase, subunit B |
Gene: RBAM_024840: holliday junction DNA helicase, subunit B |
Gene: BPUM_2415: holliday junction DNA helicase, subunit B |
Gene: BLi02900: holliday junction DNA helicase, subunit B |
Gene: Aflv_0712: holliday junction DNA helicase, subunit B |
Gene: GK2591: holliday junction DNA helicase, subunit B |
Gene: BC4414: holliday junction DNA helicase, subunit B |
Gene: BH1225: holliday junction DNA helicase, subunit B |
Gene: ABC1555: holliday junction DNA helicase, subunit B |
Gene: OB2036: holliday junction DNA helicase, subunit B |
Gene: Pjdr2_4400: holliday junction DNA helicase, subunit B |
holliday junction DNA helicase, subunit B |
| CRON 15. | ||||||||||||
| yhjE |
Gene: BSU10480: Alkaline phosphatase like protein |
*
Bacillus amyloliquefaciens FZB42 Site: position = -128 score = 4.44858 sequence = GAGAACCTTTGTTCTT Gene: RBAM_010700: Alkaline phosphatase like protein |
*
Bacillus pumilus SAFR-032 Site: position = -128 score = 4.62867 sequence = TAGAACACACGTTCTT Gene: BPUM_0990: Alkaline phosphatase like protein |
*
Bacillus licheniformis DSM 13 Site: position = -179 score = 4.54284 sequence = AGGAACATTTGTTCTG Gene: BLi01121: Alkaline phosphatase like protein |
*
Anoxybacillus flavithermus WK1 Site: position = 34 score = 4.32587 sequence = TAAAACATATGCTTGA Gene: Aflv_2232: Alkaline phosphatase like protein |
Gene: GK0679: Alkaline phosphatase like protein |
Gene: BC1135: Alkaline phosphatase like protein |
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*
Oceanobacillus iheyensis HTE831 Site: position = -166 score = 4.73602 sequence = CAGATCATATGTTCGT Gene: OB1179: Alkaline phosphatase like protein |
Gene: Pjdr2_0464: Alkaline phosphatase like protein |
Alkaline phosphatase like protein |
| addB |
Gene: BSU10620: ATP-dependent deoxyribonuclease (subunit B) |
Gene: RBAM_010790: ATP-dependent deoxyribonuclease (subunit B) |
Gene: BPUM_0993: ATP-dependent deoxyribonuclease (subunit B) |
Gene: BLi01156: ATP-dependent deoxyribonuclease (subunit B) |
Gene: Aflv_2231: ATP-dependent deoxyribonuclease (subunit B) |
*
Geobacillus kaustophilus HTA426 Site: position = -55 score = 4.09187 sequence = GCGAACATACGTGCTA Gene: GK0681: ATP-dependent deoxyribonuclease (subunit B) |
*
Bacillus cereus ATCC 14579 Site: position = -40 score = 4.48418 sequence = GCAAACTAACGTTCGT Gene: BC1137: ATP-dependent deoxyribonuclease (subunit B) |
|
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Gene: OB1181: ATP-dependent deoxyribonuclease (subunit B) |
*
Paenibacillus sp. JDR-2 Site: position = -90 score = 5.06056 sequence = CAGAACATACGTTTGT Gene: Pjdr2_2219: ATP-dependent deoxyribonuclease (subunit B) |
ATP-dependent deoxyribonuclease (subunit B) |
| addA |
Gene: BSU10630: ATP-dependent deoxyribonuclease (subunit A) |
Gene: RBAM_010800: ATP-dependent deoxyribonuclease (subunit A) |
Gene: BPUM_0994: ATP-dependent deoxyribonuclease (subunit A) |
Gene: BLi01157: ATP-dependent deoxyribonuclease (subunit A) |
*
Anoxybacillus flavithermus WK1 Site: position = -174 score = 4.25546 sequence = GCGAACAAATGATCGA Gene: Aflv_2230: ATP-dependent deoxyribonuclease (subunit A) |
Gene: GK0682: ATP-dependent deoxyribonuclease (subunit A) |
Gene: BC1138: ATP-dependent deoxyribonuclease (subunit A) |
|
|
Gene: OB1182: ATP-dependent deoxyribonuclease (subunit A) |
Gene: Pjdr2_2220: ATP-dependent deoxyribonuclease (subunit A) |
ATP-dependent deoxyribonuclease (subunit A) |
| sbcD |
Gene: BSU10640: DNA repair exonuclease subunit D |
Gene: RBAM_010810: DNA repair exonuclease subunit D |
Gene: BPUM_0995: DNA repair exonuclease subunit D |
Gene: BLi01158: DNA repair exonuclease subunit D |
Gene: Aflv_2229: DNA repair exonuclease subunit D |
Gene: GK0683: DNA repair exonuclease subunit D |
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|
DNA repair exonuclease subunit D |
| sbcC |
Gene: BSU10650: DNA repair exonuclease subunit C |
Gene: RBAM_010820: DNA repair exonuclease subunit C |
*
Bacillus pumilus SAFR-032 Site: position = -115 score = 4.23417 sequence = TCGAAGAGAGGTTCGT Gene: BPUM_0996: DNA repair exonuclease subunit C |
Gene: BLi01159: DNA repair exonuclease subunit C |
Gene: Aflv_2228: DNA repair exonuclease subunit C |
Gene: GK0684: DNA repair exonuclease subunit C |
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DNA repair exonuclease subunit C |
| yisB |
Gene: BSU10660: Putative nuclease component |
Gene: RBAM_010830: Putative nuclease component |
Gene: BPUM_0997: Putative nuclease component |
|
Gene: Aflv_2227: Putative nuclease component |
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Putative nuclease component |
| sipV |
Gene: BSU10490: Signal peptidase I (EC 3.4.21.89) |
Gene: RBAM_010710: Signal peptidase I (EC 3.4.21.89) |
|
Gene: BLi01122: Signal peptidase I (EC 3.4.21.89) |
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Gene: OB1180: Signal peptidase I (EC 3.4.21.89) |
|
Signal peptidase I (EC 3.4.21.89) |
| CRON 16. | ||||||||||||
| parE |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -220 score = 4.91287 sequence = ACAAACATACGTTCTC Gene: BSU18090: Topoisomerase IV subunit B (EC 5.99.1.-) |
*
Bacillus amyloliquefaciens FZB42 Site: position = -243 score = 4.33664 sequence = GCGAACTCATGTTCTT Gene: RBAM_017900: Topoisomerase IV subunit B (EC 5.99.1.-) |
*
Bacillus pumilus SAFR-032 Site: position = -246 score = 4.83984 sequence = TAGAACATTTGTTCTG Gene: BPUM_1709: Topoisomerase IV subunit B (EC 5.99.1.-) |
Gene: BLi02059: Topoisomerase IV subunit B (EC 5.99.1.-) |
*
Anoxybacillus flavithermus WK1 Site: position = -30 score = 4.65464 sequence = AGAAACAAATGTTCTT Gene: Aflv_1444: Topoisomerase IV subunit B (EC 5.99.1.-) |
*
Geobacillus kaustophilus HTA426 Site: position = -40 score = 4.14142 sequence = AGAAACAGGTGTTCTT Gene: GK1751: Topoisomerase IV subunit B (EC 5.99.1.-) |
*
Bacillus cereus ATCC 14579 Site: position = -44 score = 4.5544 sequence = AGAAACATATGTTCTG Gene: BC3597: Topoisomerase IV subunit B (EC 5.99.1.-) |
*
Bacillus halodurans C-125 Site: position = -72 score = 4.90488 sequence = CCGAACATGCGTTTGT Gene: BH2140: Topoisomerase IV subunit B (EC 5.99.1.-) |
*
Bacillus clausii KSM-K16 Site: position = -64 score = 4.45101 sequence = CAGAACAAACATTCGT Gene: ABC1989: Topoisomerase IV subunit B (EC 5.99.1.-) |
*
Oceanobacillus iheyensis HTE831 Site: position = -57 score = 4.58829 sequence = AAGAACAGTTGTTCTA Gene: OB1693: Topoisomerase IV subunit B (EC 5.99.1.-) |
*
Paenibacillus sp. JDR-2 Site: position = -172 score = 3.99894 sequence = GCGAATTTATGTTATT Gene: Pjdr2_2492: Topoisomerase IV subunit B (EC 5.99.1.-) |
Topoisomerase IV subunit B (EC 5.99.1.-) |
| parC |
Gene: BSU18100: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: RBAM_017910: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: BPUM_1710: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: BLi02060: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: Aflv_1443: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: GK1750: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: BC3596: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: BH2139: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: ABC1988: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: OB1694: Topoisomerase IV subunit A (EC 5.99.1.-) |
Gene: Pjdr2_2493: Topoisomerase IV subunit A (EC 5.99.1.-) |
Topoisomerase IV subunit A (EC 5.99.1.-) |
| CRON 17. | ||||||||||||
| uvrX |
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*
Oceanobacillus iheyensis HTE831 Site: position = -33 score = 5.16833 sequence = TAGAACATACGTTCTT Gene: OB1361: Putative UV-damage repair protein |
|
Putative UV-damage repair protein |
| CRON 18. | ||||||||||||
| lexA |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -73 score = 5.09152 sequence = TCGAACCTATGTTTGT Site: position = -102 score = 4.42856 sequence = ACGAACAAACGTTTCT Site: position = -139 score = 4.16574 sequence = AGGAATGTTTGTTCGC Gene: BSU17850: SOS-response transcriptional repressor |
*
Bacillus amyloliquefaciens FZB42 Site: position = -73 score = 5.09152 sequence = TCGAACCTATGTTTGT Site: position = -103 score = 4.42856 sequence = ACGAACAAACGTTTCT Site: position = -140 score = 4.49568 sequence = AAGAATGTTTGTTCGC Gene: RBAM_017650: SOS-response transcriptional repressor |
*
Bacillus pumilus SAFR-032 Site: position = -73 score = 5.09152 sequence = TCGAACCTATGTTTGT Site: position = -103 score = 4.42856 sequence = ACGAACAAACGTTTCT Site: position = -142 score = 4.60702 sequence = TAGAATGTGTGTTCGT Gene: BPUM_1686: SOS-response transcriptional repressor |
*
Bacillus licheniformis DSM 13 Site: position = -73 score = 5.09152 sequence = TCGAACCTATGTTTGT Site: position = -103 score = 4.61555 sequence = ACGAACAAATGTTTCT Site: position = -141 score = 4.24991 sequence = CAGAATGTTTGTTCGG Site: position = -346 score = 4.13796 sequence = ATGAATTTGTGTTTGT Gene: BLi02032: SOS-response transcriptional repressor |
*
Anoxybacillus flavithermus WK1 Site: position = -53 score = 5.21551 sequence = TCGAACTTATGTTTGT Site: position = -82 score = 4.7711 sequence = GAGAACTTTTGTTCGT Site: position = -110 score = 5.16202 sequence = TAGAACATTTGTTTGT Gene: Aflv_1506: SOS-response transcriptional repressor |
*
Geobacillus kaustophilus HTA426 Site: position = -74 score = 5.09152 sequence = TCGAACCTATGTTTGT Site: position = -103 score = 4.86502 sequence = AGGAACATTTGTTTGT Site: position = -136 score = 4.46274 sequence = TAGAATGTTTGTTCGC Gene: GK1328: SOS-response transcriptional repressor |
*
Bacillus cereus ATCC 14579 Site: position = -70 score = 5.21551 sequence = TCGAACTTATGTTTGT Gene: BC3690: SOS-response transcriptional repressor |
*
Bacillus halodurans C-125 Site: position = -78 score = 4.88795 sequence = TAGAACTTATGTTTGC Site: position = -107 score = 4.6553 sequence = AAGAACACTTGTTTGT Gene: BH2356: SOS-response transcriptional repressor |
*
Bacillus clausii KSM-K16 Site: position = -76 score = 4.88795 sequence = TAGAACTTATGTTTGC Site: position = -107 score = 4.59453 sequence = AGGAACAACTGTTCGT Gene: ABC2167: SOS-response transcriptional repressor |
*
Oceanobacillus iheyensis HTE831 Site: position = -78 score = 4.18558 sequence = TAGAACGAGTGTTTGC Site: position = -107 score = 4.64793 sequence = CCGAACATATGATCTT Site: position = -142 score = 4.83232 sequence = CAGAACAATTGTTCTT Gene: OB1669: SOS-response transcriptional repressor |
*
Paenibacillus sp. JDR-2 Site: position = -72 score = 5.138 sequence = AAGAACTTATGTTTGT Site: position = -118 score = 5.05966 sequence = ACGAACAAATGTTTGC Site: position = -157 score = 4.37797 sequence = CCGAACGTTTGTTCTG Gene: Pjdr2_2621: SOS-response transcriptional repressor |
SOS-response transcriptional repressor |
| CRON 19. | ||||||||||||
| hupA |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -281 score = 4.33824 sequence = AGGAATATTCGTTCGG Gene: BSU22790: DNA-binding protein HU 1 |
*
Bacillus amyloliquefaciens FZB42 Site: position = -282 score = 4.52523 sequence = AGGAATATTTGTTCGG Gene: RBAM_020950: DNA-binding protein HU 1 |
*
Bacillus pumilus SAFR-032 Site: position = -241 score = 3.91271 sequence = ACGAATAAGGATTCTT Site: position = -277 score = 4.44331 sequence = AGGAATATTCGTTCGC Gene: BPUM_2010: DNA-binding protein HU 1 |
*
Bacillus licheniformis DSM 13 Site: position = -280 score = 4.84741 sequence = AGGAATATTTGTTCGT Gene: BLi02414: DNA-binding protein HU 1 |
Gene: Aflv_1090: DNA-binding protein HU 1 |
Gene: GK2215: DNA-binding protein HU 1 |
Gene: BC1510: DNA-binding protein HU 1 |
Gene: BH1309: DNA-binding protein HU 1 |
Gene: ABC1628: DNA-binding protein HU 1 |
Gene: OB1792: DNA-binding protein HU 1 |
Gene: Pjdr2_2403: DNA-binding protein HU 1 |
DNA-binding protein HU 1 |
| CRON 20. | ||||||||||||
| dnaE |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -76 score = 4.53374 sequence = AAGAACATTTGTTTCT Gene: BSU29230: DNA polymerase III alpha subunit (EC 2.7.7.7) |
*
Bacillus amyloliquefaciens FZB42 Site: position = -69 score = 4.53374 sequence = AAGAACATTTGTTTCT Gene: RBAM_026280: DNA polymerase III alpha subunit (EC 2.7.7.7) |
*
Bacillus pumilus SAFR-032 Site: position = -73 score = 4.53374 sequence = AAGAACATTTGTTTCT Gene: BPUM_2566: DNA polymerase III alpha subunit (EC 2.7.7.7) |
*
Bacillus licheniformis DSM 13 Site: position = -74 score = 4.53374 sequence = AAGAACATTTGTTTCT Gene: BLi03072: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: Aflv_0494: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: GK2744: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: BC4605: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: BH3169: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: ABC2724: DNA polymerase III alpha subunit (EC 2.7.7.7) |
*
Oceanobacillus iheyensis HTE831 Site: position = -63 score = 4.09066 sequence = CCGTATACATGTTCGT Site: position = -161 score = 4.05215 sequence = GCGAAAAAACGTTCTT Gene: OB2177: DNA polymerase III alpha subunit (EC 2.7.7.7) |
|
DNA polymerase III alpha subunit (EC 2.7.7.7) |
| ytsJ |
Gene: BSU29220: NADP-dependent malic enzyme (EC 1.1.1.40) |
Gene: RBAM_026270: NADP-dependent malic enzyme (EC 1.1.1.40) |
Gene: BPUM_2565: NADP-dependent malic enzyme (EC 1.1.1.40) |
Gene: BLi03071: NADP-dependent malic enzyme (EC 1.1.1.40) |
Gene: Aflv_0495: NADP-dependent malic enzyme (EC 1.1.1.40) |
|
Gene: BC4604: NADP-dependent malic enzyme (EC 1.1.1.40) |
Gene: BH3168: NADP-dependent malic enzyme (EC 1.1.1.40) |
*
Bacillus clausii KSM-K16 Site: position = -188 score = 4.62946 sequence = TAAAACAAATGTTTGG Gene: ABC2723: NADP-dependent malic enzyme (EC 1.1.1.40) |
Gene: OB2176: NADP-dependent malic enzyme (EC 1.1.1.40) |
|
NADP-dependent malic enzyme (EC 1.1.1.40) |
| CRON 21. | ||||||||||||
| dinB |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -56 score = 4.79688 sequence = AAGAACTCATGTTCGT Gene: BSU05630: Nuclease inhibitor |
*
Bacillus amyloliquefaciens FZB42 Site: position = -38 score = 4.08459 sequence = AGGAACGTACGTTCTG Gene: RBAM_037680: Nuclease inhibitor |
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Nuclease inhibitor |
| CRON 22. | ||||||||||||
| BH1502 |
|
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*
Bacillus pumilus SAFR-032 Site: position = -46 score = 4.7913 sequence = AAGAACGTTTGTTCGA Site: position = -75 score = 4.37595 sequence = CAGAACAAACGTTCCT Gene: BPUM_2882: Hypothetical protein |
*
Bacillus licheniformis DSM 13 Site: position = -41 score = 5.36486 sequence = AAGAACAAATGTTCGT Gene: BLi00182: Hypothetical protein |
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*
Bacillus halodurans C-125 Site: position = -51 score = 4.7966 sequence = TCGAATGTACGTTCGT Site: position = -71 score = 4.84716 sequence = ACGAACGTACGTTCTT Gene: BH1502: Hypothetical protein |
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Hypothetical protein |
| CRON 23. | ||||||||||||
| aprX |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -180 score = 5.08978 sequence = ACGAACAAACGTTCTT Gene: BSU17260: Alkaline serine protease |
*
Bacillus amyloliquefaciens FZB42 Site: position = -146 score = 4.47232 sequence = ACGAACAAAAGTTCCA Gene: RBAM_017070: Alkaline serine protease |
Gene: BPUM_1616: Alkaline serine protease |
Gene: BLi02185: Alkaline serine protease |
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Gene: GK0210: Alkaline serine protease |
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Gene: BH1930: Alkaline serine protease |
|
2
Oceanobacillus iheyensis HTE831 Gene: OB2849: Alkaline serine protease Gene: OB2375: Alkaline serine protease |
|
Alkaline serine protease |
| CRON 24. | ||||||||||||
| pcrA |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -36 score = 4.37004 sequence = TAGAACGTATGTTTTG Gene: BSU06610: ATP-dependent DNA helicase |
*
Bacillus amyloliquefaciens FZB42 Site: position = -32 score = 5.21768 sequence = TAGAACATATGTTTGA Gene: RBAM_007010: ATP-dependent DNA helicase |
*
Bacillus pumilus SAFR-032 Site: position = -32 score = 5.21209 sequence = TAGAACATAAGTTCGA Gene: BPUM_0625: ATP-dependent DNA helicase |
*
Bacillus licheniformis DSM 13 Site: position = -33 score = 5.21768 sequence = TAGAACATATGTTTGA Gene: BLi00715: ATP-dependent DNA helicase |
*
Anoxybacillus flavithermus WK1 Site: position = -13 score = 4.4954 sequence = GAGAACATATGTTTTG Gene: Aflv_0246: ATP-dependent DNA helicase |
*
Geobacillus kaustophilus HTA426 Site: position = -31 score = 4.8346 sequence = TAGAACATATGTTTTG Gene: GK0275: ATP-dependent DNA helicase |
Gene: BC0340: ATP-dependent DNA helicase |
*
Bacillus halodurans C-125 Site: position = -8 score = 4.57801 sequence = AAGAACAAGTGTTTGG Gene: BH0648: ATP-dependent DNA helicase |
Gene: ABC1086: ATP-dependent DNA helicase |
Gene: OB0759: ATP-dependent DNA helicase |
Gene: Pjdr2_5720: ATP-dependent DNA helicase |
ATP-dependent DNA helicase |
| ligA |
Gene: BSU06620: NAD-dependent DNA ligase |
Gene: RBAM_007020: NAD-dependent DNA ligase |
Gene: BPUM_0626: NAD-dependent DNA ligase |
Gene: BLi00716: NAD-dependent DNA ligase |
Gene: Aflv_0247: NAD-dependent DNA ligase |
Gene: GK0276: NAD-dependent DNA ligase |
Gene: BC0341: NAD-dependent DNA ligase |
Gene: BH0649: NAD-dependent DNA ligase |
Gene: ABC1087: NAD-dependent DNA ligase |
Gene: OB0760: NAD-dependent DNA ligase |
Gene: Pjdr2_5719: NAD-dependent DNA ligase |
NAD-dependent DNA ligase |
| yerH |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -232 score = 4.43617 sequence = TAAAACAATTGTTCTG Gene: BSU06630: Putative lipoprotein |
Gene: RBAM_007030: Putative lipoprotein |
Gene: BPUM_0627: Putative lipoprotein |
Gene: BLi00717: Putative lipoprotein |
Gene: Aflv_0248: Putative lipoprotein |
Gene: GK0277: Putative lipoprotein |
|
Gene: BH0650: Putative lipoprotein |
Gene: ABC1088: Putative lipoprotein |
Gene: OB0761: Putative lipoprotein |
|
Putative lipoprotein |
| CRON 25. | ||||||||||||
| recA |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -87 score = 4.67016 sequence = CCGAATATGCGTTCGC Gene: BSU16940: Recombination protein A |
*
Bacillus amyloliquefaciens FZB42 Site: position = -86 score = 4.67016 sequence = CCGAATATGCGTTCGC Gene: RBAM_016780: Recombination protein A |
*
Bacillus pumilus SAFR-032 Site: position = -88 score = 5.18202 sequence = TCGAATATGTGTTCGT Gene: BPUM_1598: Recombination protein A |
*
Bacillus licheniformis DSM 13 Site: position = -86 score = 4.77793 sequence = TCGAATATGCGTTCGC Site: position = -259 score = 4.33628 sequence = TCGAATTTCAGTTCGC Gene: BLi01918: Recombination protein A |
*
Anoxybacillus flavithermus WK1 Site: position = 34 score = 4.6707 sequence = ACGAACATCTATTCGT Gene: Aflv_1530: Recombination protein A |
*
Geobacillus kaustophilus HTA426 Site: position = -85 score = 4.36052 sequence = ACGAATGGACGTTCGT Gene: GK1295: Recombination protein A |
*
Bacillus cereus ATCC 14579 Site: position = -85 score = 5.08857 sequence = TCGAATAAATGTTCGA Gene: BC3779: Recombination protein A |
*
Bacillus halodurans C-125 Site: position = -121 score = 4.88701 sequence = GCGAATAAATGTTCGT Site: position = -343 score = 4.01347 sequence = AAAAATTCACGTTTGT Gene: BH2383: Recombination protein A |
*
Bacillus clausii KSM-K16 Site: position = -132 score = 5.25915 sequence = ACGAATAAATGTTCGT Gene: ABC2199: Recombination protein A |
*
Oceanobacillus iheyensis HTE831 Site: position = -82 score = 4.37326 sequence = AAGAACATCCATTCGT Gene: OB1624: Recombination protein A |
*
Paenibacillus sp. JDR-2 Site: position = -84 score = 4.87889 sequence = ACGAATGTATGTTCGA Site: position = -297 score = 3.92105 sequence = GCGAACAATAATTTGT Gene: Pjdr2_3379: Recombination protein A |
Recombination protein A |
| pbpX |
Gene: BSU16950: penicillin-binding endopeptidase X |
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*
Bacillus licheniformis DSM 13 Site: position = -149 score = 5.30541 sequence = ACGAACATTTGTTCTT Gene: BLi00181: penicillin-binding endopeptidase X |
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penicillin-binding endopeptidase X |
| CRON 26. | ||||||||||||
| yhjD |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -35 score = 4.2666 sequence = TAGAACAAACGTTCCC Gene: BSU10470: Hypothetical protein |
*
Bacillus amyloliquefaciens FZB42 Site: position = -40 score = 4.65359 sequence = AAGAACAAAGGTTCTC Gene: RBAM_010690: Hypothetical protein |
*
Bacillus pumilus SAFR-032 Site: position = -34 score = 4.51993 sequence = AAGAACGTGTGTTCTA Gene: BPUM_0989: Hypothetical protein |
*
Bacillus licheniformis DSM 13 Site: position = -45 score = 4.56293 sequence = CAGAACAAATGTTCCT Gene: BLi01120: Hypothetical protein |
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*
Bacillus halodurans C-125 Site: position = -40 score = 4.49636 sequence = ACGAACACATGTTCCT Gene: BH2963: Hypothetical protein |
|
*
Oceanobacillus iheyensis HTE831 Site: position = -34 score = 4.46646 sequence = ACGAACATATGATCTG Gene: OB1178: Hypothetical protein |
*
Paenibacillus sp. JDR-2 Site: position = -42 score = 4.78934 sequence = TCGAACGTTTGTTCGC Gene: Pjdr2_1533: Hypothetical protein |
Hypothetical protein |
| CRON 27. | ||||||||||||
| ytrH |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -79 score = 4.65464 sequence = AGAAACAAATGTTCTT Gene: BSU29239: Sporulation membrane protein |
*
Bacillus amyloliquefaciens FZB42 Site: position = -80 score = 4.65464 sequence = AGAAACAAATGTTCTT Gene: RBAM_026290: Sporulation membrane protein |
*
Bacillus pumilus SAFR-032 Site: position = -80 score = 4.65464 sequence = AGAAACAAATGTTCTT Gene: BPUM_2567: Sporulation membrane protein |
*
Bacillus licheniformis DSM 13 Site: position = -81 score = 4.65464 sequence = AGAAACAAATGTTCTT Gene: BLi03073: Sporulation membrane protein |
Gene: Aflv_0493: Sporulation membrane protein |
Gene: GK2745: Sporulation membrane protein |
Gene: BC4606: Sporulation membrane protein |
Gene: BH3170: Sporulation membrane protein |
Gene: ABC2725: Sporulation membrane protein |
Gene: OB2178: Sporulation membrane protein |
Gene: Pjdr2_4483: Sporulation membrane protein |
Sporulation membrane protein |
| ytrI |
Gene: BSU29240: Sporulation membrane protein |
Gene: RBAM_026300: Sporulation membrane protein |
Gene: BPUM_2568: Sporulation membrane protein |
Gene: BLi03074: Sporulation membrane protein |
Gene: Aflv_0492: Sporulation membrane protein |
Gene: GK2746: Sporulation membrane protein |
Gene: BC4607: Sporulation membrane protein |
Gene: BH3171: Sporulation membrane protein |
Gene: ABC2726: Sporulation membrane protein |
Gene: OB2179: Sporulation membrane protein |
Gene: Pjdr2_4484: Sporulation membrane protein |
Sporulation membrane protein |
| CRON 28. | ||||||||||||
| ydiO |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -65 score = 5.00798 sequence = AAGAACATTCGTTCTT Gene: BSU06060: DNA-cytosine methyltransferase (EC 2.1.1.37) |
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DNA-cytosine methyltransferase (EC 2.1.1.37) |
| ydiP |
Gene: BSU06070: DNA-cytosine methyltransferase (EC 2.1.1.37) |
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DNA-cytosine methyltransferase (EC 2.1.1.37) |
| CRON 29. | ||||||||||||
| yhaO |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -64 score = 3.72515 sequence = CAGAACGTGCATTCGC Gene: BSU09910: DNA repair exonuclease family protein YhaO |
*
Bacillus amyloliquefaciens FZB42 Site: position = -70 score = 3.94226 sequence = CAGAACGTGCATTCGT Gene: RBAM_010150: DNA repair exonuclease family protein YhaO |
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Bacillus pumilus SAFR-032 Site: position = -71 score = 3.83291 sequence = TAGAACGTGCATTCGC Gene: BPUM_0934: DNA repair exonuclease family protein YhaO |
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Bacillus licheniformis DSM 13 Site: position = -51 score = 3.83291 sequence = TAGAACGTGCATTCGC Gene: BLi01068: DNA repair exonuclease family protein YhaO |
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Gene: OB1144: DNA repair exonuclease family protein YhaO |
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DNA repair exonuclease family protein YhaO |
| yhaN |
Gene: BSU09920: DNA double-strand break repair rad50 ATPase |
Gene: RBAM_010160: DNA double-strand break repair rad50 ATPase |
Gene: BPUM_0935: DNA double-strand break repair rad50 ATPase |
Gene: BLi01069: DNA double-strand break repair rad50 ATPase |
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Gene: OB1145: DNA double-strand break repair rad50 ATPase |
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DNA double-strand break repair rad50 ATPase |
| yhaM |
Gene: BSU09930: 3'-5' exoribonuclease yhaM (EC 3.1.-.-) |
Gene: RBAM_010170: 3'-5' exoribonuclease yhaM (EC 3.1.-.-) |
Gene: BPUM_0936: 3'-5' exoribonuclease yhaM (EC 3.1.-.-) |
Gene: BLi01070: 3'-5' exoribonuclease yhaM (EC 3.1.-.-) |
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Gene: OB1146: 3'-5' exoribonuclease yhaM (EC 3.1.-.-) |
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3'-5' exoribonuclease yhaM (EC 3.1.-.-) |
| yhaL |
Gene: BSU09940: Conserved hypothetical protein |
Gene: RBAM_010180: Conserved hypothetical protein |
Gene: BPUM_0937: Conserved hypothetical protein |
Gene: BLi01071: Conserved hypothetical protein |
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Gene: OB1147: Conserved hypothetical protein |
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Conserved hypothetical protein |
| CRON 30. | ||||||||||||
| yqxL |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -27 score = 4.64002 sequence = AAGAACAAAAGTTTGG Gene: BSU24740: Magnesium and cobalt transport protein |
Gene: RBAM_023060: Magnesium and cobalt transport protein |
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Gene: BLi03886: Magnesium and cobalt transport protein |
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Gene: BC3129: Magnesium and cobalt transport protein |
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Gene: Pjdr2_1003: Magnesium and cobalt transport protein |
Magnesium and cobalt transport protein |
| CRON 31. | ||||||||||||
| vpr |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -191 score = 3.9853 sequence = ACGAACGTATATTCCT Gene: BSU38090: Minor extracellular protease vpr precursor (EC 3.4.21.-) |
Gene: RBAM_035320: Minor extracellular protease vpr precursor (EC 3.4.21.-) |
Gene: BPUM_3455: Minor extracellular protease vpr precursor (EC 3.4.21.-) |
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Bacillus licheniformis DSM 13 Site: position = -213 score = 3.65775 sequence = AAGAACGTATATTCCC Gene: BLi04019: Minor extracellular protease vpr precursor (EC 3.4.21.-) |
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Bacillus halodurans C-125 Site: position = 17 score = 4.34242 sequence = TCGAACTTTTGTTAGC Gene: BH0831: Minor extracellular protease vpr precursor (EC 3.4.21.-) |
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Minor extracellular protease vpr precursor (EC 3.4.21.-) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |