Regulon of LexA in Bacillus subtilis subsp. subtilis str. 168
| Regulator type: | Transcription factor |
| TF locus tag: | BSU17850 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 44 |
| - Operons | 28 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -57
Score: 4.7 Sequence: ACGAACATACTTTCGC
Position: -29
Score: 4.9 Sequence: GCGAACATAAGTTCTT
Locus tag: BSU23710
Name: yqjW Funciton: DNA polymerase IV (EC 2.7.7.7) |
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yqjW
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DNA polymerase IV (EC 2.7.7.7)
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Position: -268
Score: 4.1 Sequence: TCGAGCAAGAGTTCTT
Locus tag: BSU24580
Name: yqhH Funciton: Uncharacterized ATP-dependent helicase YqhH, SNF2 family
Locus tag: BSU24590
Name: yqhG Funciton: Hypothetical protein |
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yqhH
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Uncharacterized ATP-dependent helicase YqhH, SNF2 family
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yqhG
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Hypothetical protein
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Position: -171
Score: 4.7 Sequence: CAGAACATAAATTCGT
Locus tag: BSU23300
Name: ypuD Funciton: Hypothetical protein |
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ypuD
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Hypothetical protein
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Position: -113
Score: 4.7 Sequence: TCGAACTTTTGTTCTG
Position: -83
Score: 4.1 Sequence: AGGAACGTTTGTTCTG
Locus tag: BSU18950
Name: yozL Funciton: Hypothetical protein |
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yozL
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Hypothetical protein
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Position: -78
Score: 4.7 Sequence: TCGAACTTTTGTTCTG
Position: -48
Score: 4.4 Sequence: AAGAACGTTTGTTCTG
Locus tag: BSU21510
Name: yozL Funciton: Hypothetical protein |
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yozL
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Hypothetical protein
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Position: -428
Score: 5.1 Sequence: ACAAACATAGGTTCGA
Position: -399
Score: 4.4 Sequence: AGAAACGTTTGTTCGT
Locus tag: BSU17870
Name: yneB Funciton: Site-specific recombinase, DNA invertase
Locus tag: BSU17880
Name: ynzC Funciton: Hypothetical protein
Locus tag: BSU17890
Name: tkt Funciton: Transketolase (EC 2.2.1.1)
Locus tag: BSU17900
Name: yneE Funciton: Hypothetical protein
Locus tag: BSU17910
Name: yneF Funciton: Hypothetical protein |
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yneB
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Site-specific recombinase, DNA invertase
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ynzC
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Hypothetical protein
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tkt
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Transketolase (EC 2.2.1.1)
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yneE
|
Hypothetical protein
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yneF
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Hypothetical protein
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Position: -125
Score: 5 Sequence: ACGAACGTATGTTTGT
Locus tag: BSU13800
Name: ykvR Funciton: Hypothetical protein |
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ykvR
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Hypothetical protein
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Position: -35
Score: 4.3 Sequence: TAGAACAAACGTTCCC
Locus tag: BSU10470
Name: yhjD Funciton: Hypothetical protein |
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yhjD
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Hypothetical protein
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Position: -140
Score: 4.6 Sequence: CAGAACATTTGTTCCT
Locus tag: BSU01520
Name: ybaK Funciton: Putative alkylated deoxynucleotide triphosphohydrolase
Locus tag: BSU01530
Name: cwlD Funciton: Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD |
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ybaK
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Putative alkylated deoxynucleotide triphosphohydrolase
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cwlD
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Germination-specific N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), cell wall hydrolase CwlD
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Position: -59
Score: 5 Sequence: AAAAACAAACGTTCGT
Locus tag: BSU28490
Name: uvrC Funciton: Excinuclease ABC subunit C |
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uvrC
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Excinuclease ABC subunit C
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Position: -93
Score: 4.9 Sequence: CCGAACTTTAGTTCGT
Locus tag: BSU35170
Name: uvrB Funciton: Excinuclease ABC subunit B
Locus tag: BSU35160
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrB
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Excinuclease ABC subunit B
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uvrA
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Excinuclease ABC subunit A
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Position: -99
Score: 4.8 Sequence: CAGAACAAGTGTTCTT
Position: -69
Score: 4.7 Sequence: CCGAACGTATGTTTGC
Locus tag: BSU35770
Name: tagC Funciton: Polyglycerol phosphate assembly and export |
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tagC
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Polyglycerol phosphate assembly and export
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Position: -127
Score: 4.4 Sequence: CAGAACGATTGTTCTT
Locus tag: BSU25690
Name: sda Funciton: Sporulation inhibitor sda |
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sda
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Sporulation inhibitor sda
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Position: -87
Score: 4.7 Sequence: CCGAATATGCGTTCGC
Locus tag: BSU16940
Name: recA Funciton: Recombination protein A
Locus tag: BSU16950
Name: pbpX Funciton: penicillin-binding endopeptidase X |
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recA
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Recombination protein A
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pbpX
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penicillin-binding endopeptidase X
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Position: -220
Score: 4.9 Sequence: ACAAACATACGTTCTC
Locus tag: BSU18090
Name: parE Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: BSU18100
Name: parC Funciton: Topoisomerase IV subunit A (EC 5.99.1.-) |
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parE
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Topoisomerase IV subunit B (EC 5.99.1.-)
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parC
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Topoisomerase IV subunit A (EC 5.99.1.-)
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Position: -139
Score: 4.2 Sequence: AGGAATGTTTGTTCGC
Position: -102
Score: 4.4 Sequence: ACGAACAAACGTTTCT
Position: -73
Score: 5.1 Sequence: TCGAACCTATGTTTGT
Locus tag: BSU17850
Name: lexA Funciton: SOS-response transcriptional repressor |
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lexA
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SOS-response transcriptional repressor
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Position: -281
Score: 4.3 Sequence: AGGAATATTCGTTCGG
Locus tag: BSU22790
Name: hupA Funciton: DNA-binding protein HU 1 |
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hupA
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DNA-binding protein HU 1
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Position: -76
Score: 4.5 Sequence: AAGAACATTTGTTTCT
Locus tag: BSU29230
Name: dnaE Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
Locus tag: BSU29220
Name: ytsJ Funciton: NADP-dependent malic enzyme (EC 1.1.1.40) |
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dnaE
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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ytsJ
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NADP-dependent malic enzyme (EC 1.1.1.40)
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Position: -56
Score: 4.8 Sequence: AAGAACTCATGTTCGT
Locus tag: BSU05630
Name: dinB Funciton: Nuclease inhibitor |
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dinB
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Nuclease inhibitor
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Position: -180
Score: 5.1 Sequence: ACGAACAAACGTTCTT
Locus tag: BSU17260
Name: aprX Funciton: Alkaline serine protease |
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aprX
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Alkaline serine protease
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Position: -64
Score: 3.7 Sequence: CAGAACGTGCATTCGC
Locus tag: BSU09910
Name: yhaO Funciton: DNA repair exonuclease family protein YhaO
Locus tag: BSU09920
Name: yhaN Funciton: DNA double-strand break repair rad50 ATPase
Locus tag: BSU09930
Name: yhaM Funciton: 3'-5' exoribonuclease yhaM (EC 3.1.-.-)
Locus tag: BSU09940
Name: yhaL Funciton: Conserved hypothetical protein |
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yhaO
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DNA repair exonuclease family protein YhaO
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yhaN
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DNA double-strand break repair rad50 ATPase
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yhaM
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3'-5' exoribonuclease yhaM (EC 3.1.-.-)
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yhaL
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Conserved hypothetical protein
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Position: -36
Score: 4.4 Sequence: TAGAACGTATGTTTTG
Locus tag: BSU06610
Name: pcrA Funciton: ATP-dependent DNA helicase
Locus tag: BSU06620
Name: ligA Funciton: NAD-dependent DNA ligase |
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pcrA
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ATP-dependent DNA helicase
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ligA
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NAD-dependent DNA ligase
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Position: -232
Score: 4.4 Sequence: TAAAACAATTGTTCTG
Locus tag: BSU06630
Name: yerH Funciton: Putative lipoprotein |
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yerH
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Putative lipoprotein
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Position: -27
Score: 4.6 Sequence: AAGAACAAAAGTTTGG
Locus tag: BSU24740
Name: yqxL Funciton: Magnesium and cobalt transport protein |
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yqxL
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Magnesium and cobalt transport protein
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Position: -79
Score: 4.7 Sequence: AGAAACAAATGTTCTT
Locus tag: BSU29239
Name: ytrH Funciton: Sporulation membrane protein
Locus tag: BSU29240
Name: ytrI Funciton: Sporulation membrane protein |
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ytrH
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Sporulation membrane protein
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ytrI
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Sporulation membrane protein
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Position: -191
Score: 4 Sequence: ACGAACGTATATTCCT
Locus tag: BSU38090
Name: vpr Funciton: Minor extracellular protease vpr precursor (EC 3.4.21.-) |
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vpr
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Minor extracellular protease vpr precursor (EC 3.4.21.-)
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Position: -65
Score: 5 Sequence: AAGAACATTCGTTCTT
Locus tag: BSU06060
Name: ydiO Funciton: DNA-cytosine methyltransferase (EC 2.1.1.37)
Locus tag: BSU06070
Name: ydiP Funciton: DNA-cytosine methyltransferase (EC 2.1.1.37) |
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ydiO
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DNA-cytosine methyltransferase (EC 2.1.1.37)
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ydiP
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DNA-cytosine methyltransferase (EC 2.1.1.37)
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Position: -30
Score: 4.9 Sequence: CAGAACAAACGTTCGA
Locus tag: BSU12500
Name: xkdA Funciton: Phage-like element PBSX protein xkdA |
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xkdA
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Phage-like element PBSX protein xkdA
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |