Regulon of LexA in Bacillus clausii KSM-K16
| Regulator type: | Transcription factor |
| TF locus tag: | ABC2167 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -85
Score: 4.1 Sequence: CCGAACGTCTATTCGT
Locus tag: ABC3826
Name: yqjW Funciton: DNA polymerase IV (EC 2.7.7.7) |
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yqjW
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DNA polymerase IV (EC 2.7.7.7)
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Position: -443
Score: 4.4 Sequence: ACGAACAGTTGTTCCT
Position: -414
Score: 4 Sequence: CAGAACAAACATTCTC
Locus tag: ABC2166
Name: yneB Funciton: Site-specific recombinase, DNA invertase |
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yneB
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Site-specific recombinase, DNA invertase
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Position: -337
Score: 4.4 Sequence: TAGTACGTATGTTCGT
Locus tag: ABC3059
Name: uvrB Funciton: Excinuclease ABC subunit B
Locus tag: ABC3058
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrB
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Excinuclease ABC subunit B
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uvrA
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Excinuclease ABC subunit A
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Position: -43
Score: 4.4 Sequence: AGAAATAAATGTTCGC
Locus tag: ABC1554
Name: ruvA Funciton: holliday junction DNA helicase, subunit A
Locus tag: ABC1555
Name: ruvB Funciton: holliday junction DNA helicase, subunit B |
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ruvA
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holliday junction DNA helicase, subunit A
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ruvB
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holliday junction DNA helicase, subunit B
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Position: -132
Score: 5.3 Sequence: ACGAATAAATGTTCGT
Locus tag: ABC2199
Name: recA Funciton: Recombination protein A |
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recA
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Recombination protein A
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Position: -64
Score: 4.5 Sequence: CAGAACAAACATTCGT
Locus tag: ABC1989
Name: parE Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: ABC1988
Name: parC Funciton: Topoisomerase IV subunit A (EC 5.99.1.-) |
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parE
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Topoisomerase IV subunit B (EC 5.99.1.-)
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parC
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Topoisomerase IV subunit A (EC 5.99.1.-)
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Position: -107
Score: 4.6 Sequence: AGGAACAACTGTTCGT
Position: -76
Score: 4.9 Sequence: TAGAACTTATGTTTGC
Locus tag: ABC2167
Name: lexA Funciton: SOS-response transcriptional repressor |
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lexA
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SOS-response transcriptional repressor
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Position: -188
Score: 4.6 Sequence: TAAAACAAATGTTTGG
Locus tag: ABC2723
Name: ytsJ Funciton: NADP-dependent malic enzyme (EC 1.1.1.40) |
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ytsJ
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NADP-dependent malic enzyme (EC 1.1.1.40)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |