Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Anoxybacillus flavithermus WK1

Properties
Regulator type: Transcription factor
TF locus tag: Aflv_1506
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Bacillales
Statistics of regulated genes:
- Genes 26
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 206 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -274
Score: 4.6
Sequence: TCAAACAAGAGTTCTT
Locus tag: Aflv_0914
Name: yqhH
Funciton: Uncharacterized ATP-dependent helicase YqhH, SNF2 family
Locus tag: Aflv_0913
Name: yqhG
Funciton: Hypothetical protein
Aflv_0914
yqhH
Uncharacterized ATP-dependent helicase YqhH, SNF2 family
Aflv_0913
yqhG
Hypothetical protein
Position: -404
Score: 5.2
Sequence: ACAAACATAAGTTCGA
Position: -375
Score: 4.9
Sequence: ACGAACAAAAGTTCTC
Position: -347
Score: 5
Sequence: ACAAACAAATGTTCTA
Locus tag: Aflv_1504
Name: yneB
Funciton: Site-specific recombinase, DNA invertase
Locus tag: Aflv_1503
Name: ynzC
Funciton: Hypothetical protein
Locus tag: Aflv_1502
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
Locus tag: Aflv_1501
Name: yneF
Funciton: Hypothetical protein
Aflv_1504
yneB
Site-specific recombinase, DNA invertase
Aflv_1503
ynzC
Hypothetical protein
Aflv_1502
tkt
Transketolase (EC 2.2.1.1)
Aflv_1501
yneF
Hypothetical protein
Position: -81
Score: 5.1
Sequence: TAGAATATTTGTTCGT
Locus tag: Aflv_2547
Name: uvrB
Funciton: Excinuclease ABC subunit B
Locus tag: Aflv_2546
Name: uvrA
Funciton: Excinuclease ABC subunit A
Aflv_2547
uvrB
Excinuclease ABC subunit B
Aflv_2546
uvrA
Excinuclease ABC subunit A
Position: -181
Score: 4
Sequence: AAAAACCGACGTTTTT
Position: -57
Score: 4.4
Sequence: CAGAACGATTGTTCTT
Locus tag: Aflv_0810
Name: sda
Funciton: Sporulation inhibitor sda
Aflv_0810
sda
Sporulation inhibitor sda
Position: -282
Score: 4.1
Sequence: CAGAAGATTCGTTTGA
Locus tag: Aflv_0710
Name: null
Funciton: forespore regulator of the sigma-K checkpoint
Locus tag: Aflv_0711
Name: ruvA
Funciton: holliday junction DNA helicase, subunit A
Locus tag: Aflv_0712
Name: ruvB
Funciton: holliday junction DNA helicase, subunit B
Aflv_0710
forespore regulator of the sigma-K checkpoint
Aflv_0711
ruvA
holliday junction DNA helicase, subunit A
Aflv_0712
ruvB
holliday junction DNA helicase, subunit B
Position: -30
Score: 4.7
Sequence: AGAAACAAATGTTCTT
Locus tag: Aflv_1444
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: Aflv_1443
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
Aflv_1444
parE
Topoisomerase IV subunit B (EC 5.99.1.-)
Aflv_1443
parC
Topoisomerase IV subunit A (EC 5.99.1.-)
Position: -110
Score: 5.2
Sequence: TAGAACATTTGTTTGT
Position: -82
Score: 4.8
Sequence: GAGAACTTTTGTTCGT
Position: -53
Score: 5.2
Sequence: TCGAACTTATGTTTGT
Locus tag: Aflv_1506
Name: lexA
Funciton: SOS-response transcriptional repressor
Aflv_1506
lexA
SOS-response transcriptional repressor
Position: -13
Score: 4.5
Sequence: GAGAACATATGTTTTG
Locus tag: Aflv_0246
Name: pcrA
Funciton: ATP-dependent DNA helicase
Locus tag: Aflv_0247
Name: ligA
Funciton: NAD-dependent DNA ligase
Locus tag: Aflv_0248
Name: yerH
Funciton: Putative lipoprotein
Aflv_0246
pcrA
ATP-dependent DNA helicase
Aflv_0247
ligA
NAD-dependent DNA ligase
Aflv_0248
yerH
Putative lipoprotein
Position: -174
Score: 4.3
Sequence: GCGAACAAATGATCGA
Position: 34
Score: 4.3
Sequence: TAAAACATATGCTTGA
Locus tag: Aflv_2232
Name: yhjE
Funciton: Alkaline phosphatase like protein
Locus tag: Aflv_2231
Name: addB
Funciton: ATP-dependent deoxyribonuclease (subunit B)
Locus tag: Aflv_2230
Name: addA
Funciton: ATP-dependent deoxyribonuclease (subunit A)
Locus tag: Aflv_2229
Name: sbcD
Funciton: DNA repair exonuclease subunit D
Locus tag: Aflv_2228
Name: sbcC
Funciton: DNA repair exonuclease subunit C
Locus tag: Aflv_2227
Name: yisB
Funciton: Putative nuclease component
Aflv_2232
yhjE
Alkaline phosphatase like protein
Aflv_2231
addB
ATP-dependent deoxyribonuclease (subunit B)
Aflv_2230
addA
ATP-dependent deoxyribonuclease (subunit A)
Aflv_2229
sbcD
DNA repair exonuclease subunit D
Aflv_2228
sbcC
DNA repair exonuclease subunit C
Aflv_2227
yisB
Putative nuclease component
Position: 34
Score: 4.7
Sequence: ACGAACATCTATTCGT
Locus tag: Aflv_1530
Name: recA
Funciton: Recombination protein A
Aflv_1530
recA
Recombination protein A
Position: -54
Score: 5.4
Sequence: AAGAACATATGTTTGT
Locus tag: Aflv_0776
Name: xkdA
Funciton: Phage-like element PBSX protein xkdA
Aflv_0776
xkdA
Phage-like element PBSX protein xkdA
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