Propagation of CodY regulog to Oceanobacillus iheyensis HTE831
| Source regulog: | CodY - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | CodY |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Oceanobacillus iheyensis HTE831 |
| Orthologous TF(s) | OB1551 |
| Regulated genes | 50 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -36
Score: 4.9 Sequence: AATTTTCTGAAAAAA
Locus tag: OB0021
|
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| OB0021 | -36 | 4.9 | AATTTTCTGAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltO | ||||
| Ortholog function: Proton/sodium-glutamate symport protein | ||||
| Bacillus pumilus SAFR-032 | BPUM_0421 | -252 | 5 | AATTTTCTAAAAATA |
| -230 | 4.4 | AATAGTATGAAAATA | ||
| Anoxybacillus flavithermus WK1 | Aflv_1459 | -140 | 4.9 | ATTTTTCTGACAATT |
| Bacillus cereus ATCC 14579 | BC1389 | -88 | 4.6 | AAAATTCAGAAAATA |
| Bacillus halodurans C-125 | BH3820 | -258 | 4.4 | TATTTTTTGAAAAAA |
| Bacillus clausii KSM-K16 | ABC3908 | -77 | 4.3 | AATTTTTAATAAAAT |
| Oceanobacillus iheyensis HTE831 | OB0021 | -36 | 4.9 | AATTTTCTGAAAAAA |
|
Position: -227
Score: 4.5 Sequence: AATATTCTGTTAATT
Locus tag: OB0266
|
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| OB0266 | -227 | 4.5 | AATATTCTGTTAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sspO | ||||
| Ortholog function: Small, acid-soluble spore protein O | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17990 | -170 | 4.7 | AATTTTCTCACAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_017790 | -169 | 4.7 | AATTTTCTCACAATT |
| Bacillus pumilus SAFR-032 | BPUM_1698 | -183 | 4.6 | AATTCTCAGAAAAAT |
| -152 | 4.7 | AATTTTCTCACAATT | ||
| Bacillus licheniformis DSM 13 | BLi02046 | -171 | 4.7 | AATTTTCTCACAATT |
| Oceanobacillus iheyensis HTE831 | OB0266 | -227 | 4.5 | AATATTCTGTTAATT |
|
Position: -89
Score: 4.4 Sequence: AATTTTTAGATAAAA
Locus tag: OB0438
|
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| OB0438 | -89 | 4.4 | AATTTTTAGATAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metA | ||||
| Ortholog function: Homoserine O-succinyltransferase (EC 2.3.1.46) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1464 | -51 | 5.3 | AATTTTCTAAAAATT |
| Oceanobacillus iheyensis HTE831 | OB0438 | -89 | 4.4 | AATTTTTAGATAAAA |
|
Position: -122
Score: 4.4 Sequence: AATTGAAAGAAAATT
Position: -48
Score: 4.4 Sequence: CATTTTTTGACAATT
Locus tag: OB0463
|
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| OB0463 | -122 | 4.4 | AATTGAAAGAAAATT | |
| -48 | 4.4 | CATTTTTTGACAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppA2 | ||||
| Ortholog function: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) | ||||
| Bacillus halodurans C-125 | BH0031 | -295 | 4.5 | AATATTTTGACAAAT |
| Oceanobacillus iheyensis HTE831 | OB0463 | -122 | 4.4 | AATTGAAAGAAAATT |
| Oceanobacillus iheyensis HTE831 | OB3071 | -186 | 4.8 | AATTTTCGGAATATT |
| -87 | 4.7 | AATTTTTTAAAAAAT | ||
| -86 | 4.5 | ATTTTTTAAAAAATA | ||
|
Position: -56
Score: 4.4 Sequence: TATTATCAGATTATT
Locus tag: OB0994
|
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| OB0994 | -56 | 4.4 | TATTATCAGATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yocS | ||||
| Ortholog function: Sodium-dependent transporter | ||||
| Bacillus pumilus SAFR-032 | BPUM_1860 | -62 | 4.9 | TTTTTTCAGAAAATT |
| Bacillus halodurans C-125 | BH0858 | 26 | 4.4 | ATTTTTCAGTAAATA |
| Oceanobacillus iheyensis HTE831 | OB0994 | -56 | 4.4 | TATTATCAGATTATT |
|
Position: -108
Score: 4.4 Sequence: ATTTTTCTGAAATAT
Locus tag: OB1004
|
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| OB1004 | -108 | 4.4 | ATTTTTCTGAAATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnH | ||||
| Ortholog function: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2) | ||||
| Oceanobacillus iheyensis HTE831 | OB1004 | -108 | 4.4 | ATTTTTCTGAAATAT |
|
Position: -58
Score: 4.3 Sequence: AATTATATGAATAAT
Locus tag: OB1157
|
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| OB1157 | -58 | 4.3 | AATTATATGAATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhaA | ||||
| Ortholog function: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU10070 | -57 | 4.4 | AATATTCAGACTTTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_010310 | -57 | 4.2 | AATCTTCTGACATTT |
| Bacillus pumilus SAFR-032 | BPUM_0954 | -58 | 4.2 | AAGATTCTAACAATT |
| Bacillus licheniformis DSM 13 | BLi01088 | -50 | 4.9 | AATTGTCATAAAATT |
| Oceanobacillus iheyensis HTE831 | OB1157 | -58 | 4.3 | AATTATATGAATAAT |
|
Position: -94
Score: 4.5 Sequence: TTTATTCTAAAAATT
Position: -83
Score: 4.2 Sequence: AATTATGTAAAAATA
Locus tag: OB1177
|
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| OB1177 | -94 | 4.5 | TTTATTCTAAAAATT | |
| -83 | 4.2 | AATTATGTAAAAATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: comK | ||||
| Ortholog function: Competence transcription factor | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU10420 | -225 | 4.5 | AATTTTTAGACAACT |
| Bacillus amyloliquefaciens FZB42 | RBAM_010600 | -88 | 4.2 | TATATTCAAAAAAAA |
| Bacillus pumilus SAFR-032 | BPUM_0978 | -222 | 5 | AATTTTTAGACAATT |
| Bacillus licheniformis DSM 13 | BLi01119 | -205 | 5.3 | AATTTTTAGAAAATT |
| Oceanobacillus iheyensis HTE831 | OB1177 | -94 | 4.5 | TTTATTCTAAAAATT |
|
Position: -113
Score: 4.6 Sequence: AATTTTCTAAAAACA
Locus tag: OB1212
|
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| OB1212 | -113 | 4.6 | AATTTTCTAAAAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnB | ||||
| Ortholog function: Nitrogen regulatory protein P-II | ||||
| Bacillus licheniformis DSM 13 | BLi01176 | -103 | 5 | ATTTTTTTGAAAATT |
| Oceanobacillus iheyensis HTE831 | OB1212 | -113 | 4.6 | AATTTTCTAAAAACA |
|
Position: -66
Score: 4.8 Sequence: ATTTTTAAGAAAATT
Locus tag: OB1787
|
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| OB1787 | -66 | 4.8 | ATTTTTAAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndk | ||||
| Ortholog function: Nucleoside diphosphate kinase (EC 2.7.4.6) | ||||
| Bacillus licheniformis DSM 13 | BLi02408 | -74 | 4.7 | AATTGTTTGAAAAAT |
| Oceanobacillus iheyensis HTE831 | OB1787 | -66 | 4.8 | ATTTTTAAGAAAATT |
|
Position: -67
Score: 4.4 Sequence: AAAATTCAAAAAATA
Locus tag: OB2122
|
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| OB2122 | -67 | 4.4 | AAAATTCAAAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lcfA | ||||
| Ortholog function: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0564 | -56 | 4.8 | AAATTTCAGAAAATA |
| Bacillus cereus ATCC 14579 | BC4526 | -277 | 4.4 | AAAAGTCAGAATATT |
| Oceanobacillus iheyensis HTE831 | OB2122 | -67 | 4.4 | AAAATTCAAAAAATA |
|
Position: -222
Score: 4.3 Sequence: AAATATTAAAAAATT
Locus tag: OB2168
|
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| OB2168 | -222 | 4.3 | AAATATTAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citZ | ||||
| Ortholog function: Citrate synthase (si) (EC 2.3.3.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29140 | -224 | 4.3 | AAATGTCTGATTATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026180 | -224 | 4.2 | ATTAATCAGATTATT |
| Bacillus pumilus SAFR-032 | BPUM_2556 | -210 | 4.3 | AAATGTCTGATTATT |
| Bacillus licheniformis DSM 13 | BLi03062 | -225 | 4.5 | AAATGTCTGATAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0504 | -209 | 4.3 | AAAAGTCTGATAATT |
| Geobacillus kaustophilus HTA426 | GK2736 | -201 | 4.3 | AAAAGTCTGATAATT |
| Oceanobacillus iheyensis HTE831 | OB2168 | -222 | 4.3 | AAATATTAAAAAATT |
|
Position: -85
Score: 4.6 Sequence: AAATTTCAAAAAATA
Locus tag: OB2221
|
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| OB2221 | -85 | 4.6 | AAATTTCAAAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuA | ||||
| Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29690 | -97 | 4.6 | AATTTTTAAAATATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_026810 | -100 | 4.6 | AATTTTTAAAATATA |
| Bacillus pumilus SAFR-032 | BPUM_2617 | -93 | 4.6 | AATTTTTAAAAAACT |
| Bacillus licheniformis DSM 13 | BLi03120 | -96 | 4.8 | AATTTTTAAAAAATA |
| Anoxybacillus flavithermus WK1 | Aflv_0461 | -101 | 5.1 | AATTTTTAAAAAATT |
| Geobacillus kaustophilus HTA426 | GK2807 | -112 | 4.9 | AATTTTTAAAATATT |
| -87 | 4.4 | ACTTTTTTGAAATTT | ||
| Bacillus cereus ATCC 14579 | BC4660 | -110 | 4.8 | AATTTTCAGTATATT |
| Oceanobacillus iheyensis HTE831 | OB2221 | -85 | 4.6 | AAATTTCAAAAAATA |
|
Position: -49
Score: 4.5 Sequence: AATTGTTAGAATAAT
Locus tag: OB2303
|
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| OB2303 | -49 | 4.5 | AATTGTTAGAATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltZ | ||||
| Ortholog function: Proton/glutamate symport protein @ Sodium/glutamate symport protein | ||||
| Bacillus licheniformis DSM 13 | BLi03198 | -98 | 4.5 | TATTATTTGAAAATA |
| Oceanobacillus iheyensis HTE831 | OB2303 | -49 | 4.5 | AATTGTTAGAATAAT |
|
Position: -58
Score: 4.8 Sequence: AATTTTCAGTATATT
Locus tag: OB2453
|
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| OB2453 | -58 | 4.8 | AATTTTCAGTATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: appD | ||||
| Ortholog function: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0356 | -48 | 4.7 | AATTTTTTGAATTTT |
| -26 | 4.5 | TATTTTTTTAATATT | ||
| Oceanobacillus iheyensis HTE831 | OB2453 | -58 | 4.8 | AATTTTCAGTATATT |
|
Position: -86
Score: 4.2 Sequence: AATTAATTTAAAATT
Locus tag: OB2628
|
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| OB2628 | -86 | 4.2 | AATTAATTTAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybgE | ||||
| Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU02390 | -118 | 4.9 | AATATTCTGAAATTT |
| -38 | 4.6 | AATATTTAAACAATT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_002760 | -152 | 4.4 | AAAATTTTGATAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_035750 | -48 | 4.3 | TATTTTCAAATAAGT |
| Bacillus pumilus SAFR-032 | BPUM_3500 | -226 | 4.4 | AATTGTCAGATTAAT |
|
Position: -96
Score: 4.5 Sequence: TATAATCAGAATATT
Locus tag: OB2643
|
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| OB2643 | -96 | 4.5 | TATAATCAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytcI | ||||
| Ortholog function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases | ||||
| Bacillus pumilus SAFR-032 | BPUM_2600 | -158 | 4.6 | AATAGTTTGAATATT |
| Bacillus cereus ATCC 14579 | BC4645 | -58 | 4.7 | AATTAACTGAAAATT |
| Oceanobacillus iheyensis HTE831 | OB2643 | -96 | 4.5 | TATAATCAGAATATT |
|
Position: -40
Score: 4.5 Sequence: AATATAATGAAAATT
Locus tag: OB2833
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| OB2833 | -40 | 4.5 | AATATAATGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpQ | ||||
| Ortholog function: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) | ||||
| Bacillus licheniformis DSM 13 | BLi04156 | -91 | 4.7 | AAATTTATGAAAATT |
| Oceanobacillus iheyensis HTE831 | OB2833 | -40 | 4.5 | AATATAATGAAAATT |
|
Position: -96
Score: 4.5 Sequence: AATATTCAGATTAAT
Position: -41
Score: 4.5 Sequence: AATTAATAGAAAATT
Locus tag: OB2971
|
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| OB2971 | -96 | 4.5 | AATATTCAGATTAAT | |
| -41 | 4.5 | AATTAATAGAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dppA | ||||
| Ortholog function: D-aminopeptidase (EC 3.4.11.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU12920 | -43 | 4.5 | ATTTGTTAGAATATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_012770 | -58 | 4.5 | ATTTGTTAGAATATT |
| Bacillus pumilus SAFR-032 | BPUM_1184 | -55 | 5 | ATTTTTTAGAAAATT |
| Bacillus licheniformis DSM 13 | BLi01392 | -61 | 4.5 | ATTTGTTAGAATATT |
| Oceanobacillus iheyensis HTE831 | OB2971 | -96 | 4.5 | AATATTCAGATTAAT |
| -41 | 4.5 | AATTAATAGAAAATT | ||
|
Position: -112
Score: 4.5 Sequence: TATTTTTACAAAATT
Locus tag: OB3067
|
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| OB3067 | -112 | 4.5 | TATTTTTACAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dppC | ||||
| Ortholog function: Oligopeptide ABC transporter permease | ||||
| Bacillus halodurans C-125 | BH0030 | -46 | 4.5 | ATTTGTCAAAATATT |
| Oceanobacillus iheyensis HTE831 | OB3067 | -112 | 4.5 | TATTTTTACAAAATT |
|
Position: -186
Score: 4.8 Sequence: AATTTTCGGAATATT
Position: -87
Score: 4.7 Sequence: AATTTTTTAAAAAAT
Position: -86
Score: 4.5 Sequence: ATTTTTTAAAAAATA
Position: 4
Score: 4.5 Sequence: AATTGTCAAAAAAGT
Locus tag: OB3071
|
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| OB3071 | -186 | 4.8 | AATTTTCGGAATATT | |
| -87 | 4.7 | AATTTTTTAAAAAAT | ||
| -86 | 4.5 | ATTTTTTAAAAAATA | ||
| 4 | 4.5 | AATTGTCAAAAAAGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppA2 | ||||
| Ortholog function: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) | ||||
| Bacillus halodurans C-125 | BH0031 | -295 | 4.5 | AATATTTTGACAAAT |
| Oceanobacillus iheyensis HTE831 | OB0463 | -122 | 4.4 | AATTGAAAGAAAATT |
| Oceanobacillus iheyensis HTE831 | OB3071 | -186 | 4.8 | AATTTTCGGAATATT |
| -87 | 4.7 | AATTTTTTAAAAAAT | ||
| -86 | 4.5 | ATTTTTTAAAAAATA | ||
|
Position: -202
Score: 4.6 Sequence: AAATTTCAAAAAATA
Locus tag: OB3099
|
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| OB3099 | -202 | 4.6 | AAATTTCAAAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltA | ||||
| Ortholog function: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | ||||
| Bacillus halodurans C-125 | BH1728 | -94 | 4.5 | AAATGTCAGAAAAAT |
| Oceanobacillus iheyensis HTE831 | OB3099 | -202 | 4.6 | AAATTTCAAAAAATA |
|
Position: -101
Score: 4.4 Sequence: AATAATCAGAAAAAA
Locus tag: OB3129
|
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| OB3129 | -101 | 4.4 | AATAATCAGAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argG | ||||
| Ortholog function: Argininosuccinate synthase (EC 6.3.4.5) | ||||
| Bacillus cereus ATCC 14579 | BC4630 | -108 | 4.4 | AATTGTTTGAAAAAA |
| Oceanobacillus iheyensis HTE831 | OB3129 | -101 | 4.4 | AATAATCAGAAAAAA |
|
Position: -264
Score: 4.4 Sequence: AATAGTATGATAATT
Locus tag: OB3328
|
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| OB3328 | -264 | 4.4 | AATAGTATGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gldA | ||||
| Ortholog function: Glycerol dehydrogenase (EC 1.1.1.6) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_002680 | -55 | 4.5 | TATTTTCTGACAAGT |
| Oceanobacillus iheyensis HTE831 | OB3328 | -264 | 4.4 | AATAGTATGATAATT |