Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CodY regulog to Oceanobacillus iheyensis HTE831

Reference regulog properties
Source regulog: CodY - Bacillales
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode:
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Oceanobacillus iheyensis HTE831
Orthologous TF(s) OB1551
Regulated genes 50
Built upon 445 sites [see more]
Predicted regulatory interactions in Oceanobacillus iheyensis HTE831
Locus tag Position Score Sequence
Position: -36
Score: 4.9
Sequence: AATTTTCTGAAAAAA
Locus tag: OB0021
OB0021 -36 4.9 AATTTTCTGAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltO
Ortholog function: Proton/sodium-glutamate symport protein
Bacillus pumilus SAFR-032 BPUM_0421 -252 5 AATTTTCTAAAAATA
-230 4.4 AATAGTATGAAAATA
Anoxybacillus flavithermus WK1 Aflv_1459 -140 4.9 ATTTTTCTGACAATT
Bacillus cereus ATCC 14579 BC1389 -88 4.6 AAAATTCAGAAAATA
Bacillus halodurans C-125 BH3820 -258 4.4 TATTTTTTGAAAAAA
Bacillus clausii KSM-K16 ABC3908 -77 4.3 AATTTTTAATAAAAT
Oceanobacillus iheyensis HTE831 OB0021 -36 4.9 AATTTTCTGAAAAAA
Position: -227
Score: 4.5
Sequence: AATATTCTGTTAATT
Locus tag: OB0266
OB0266 -227 4.5 AATATTCTGTTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sspO
Ortholog function: Small, acid-soluble spore protein O
Bacillus subtilis subsp. subtilis str. 168 BSU17990 -170 4.7 AATTTTCTCACAATT
Bacillus amyloliquefaciens FZB42 RBAM_017790 -169 4.7 AATTTTCTCACAATT
Bacillus pumilus SAFR-032 BPUM_1698 -183 4.6 AATTCTCAGAAAAAT
-152 4.7 AATTTTCTCACAATT
Bacillus licheniformis DSM 13 BLi02046 -171 4.7 AATTTTCTCACAATT
Oceanobacillus iheyensis HTE831 OB0266 -227 4.5 AATATTCTGTTAATT
Position: -89
Score: 4.4
Sequence: AATTTTTAGATAAAA
Locus tag: OB0438
OB0438 -89 4.4 AATTTTTAGATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: metA
Ortholog function: Homoserine O-succinyltransferase (EC 2.3.1.46)
Anoxybacillus flavithermus WK1 Aflv_1464 -51 5.3 AATTTTCTAAAAATT
Oceanobacillus iheyensis HTE831 OB0438 -89 4.4 AATTTTTAGATAAAA
Position: -122
Score: 4.4
Sequence: AATTGAAAGAAAATT
Position: -48
Score: 4.4
Sequence: CATTTTTTGACAATT
Locus tag: OB0463
OB0463 -122 4.4 AATTGAAAGAAAATT
-48 4.4 CATTTTTTGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppA2
Ortholog function: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Bacillus halodurans C-125 BH0031 -295 4.5 AATATTTTGACAAAT
Oceanobacillus iheyensis HTE831 OB0463 -122 4.4 AATTGAAAGAAAATT
Oceanobacillus iheyensis HTE831 OB3071 -186 4.8 AATTTTCGGAATATT
-87 4.7 AATTTTTTAAAAAAT
-86 4.5 ATTTTTTAAAAAATA
Position: -56
Score: 4.4
Sequence: TATTATCAGATTATT
Locus tag: OB0994
OB0994 -56 4.4 TATTATCAGATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yocS
Ortholog function: Sodium-dependent transporter
Bacillus pumilus SAFR-032 BPUM_1860 -62 4.9 TTTTTTCAGAAAATT
Bacillus halodurans C-125 BH0858 26 4.4 ATTTTTCAGTAAATA
Oceanobacillus iheyensis HTE831 OB0994 -56 4.4 TATTATCAGATTATT
Position: -108
Score: 4.4
Sequence: ATTTTTCTGAAATAT
Locus tag: OB1004
OB1004 -108 4.4 ATTTTTCTGAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnH
Ortholog function: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
Oceanobacillus iheyensis HTE831 OB1004 -108 4.4 ATTTTTCTGAAATAT
Position: -58
Score: 4.3
Sequence: AATTATATGAATAAT
Locus tag: OB1157
OB1157 -58 4.3 AATTATATGAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhaA
Ortholog function: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
Bacillus subtilis subsp. subtilis str. 168 BSU10070 -57 4.4 AATATTCAGACTTTT
Bacillus amyloliquefaciens FZB42 RBAM_010310 -57 4.2 AATCTTCTGACATTT
Bacillus pumilus SAFR-032 BPUM_0954 -58 4.2 AAGATTCTAACAATT
Bacillus licheniformis DSM 13 BLi01088 -50 4.9 AATTGTCATAAAATT
Oceanobacillus iheyensis HTE831 OB1157 -58 4.3 AATTATATGAATAAT
Position: -94
Score: 4.5
Sequence: TTTATTCTAAAAATT
Position: -83
Score: 4.2
Sequence: AATTATGTAAAAATA
Locus tag: OB1177
OB1177 -94 4.5 TTTATTCTAAAAATT
-83 4.2 AATTATGTAAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: comK
Ortholog function: Competence transcription factor
Bacillus subtilis subsp. subtilis str. 168 BSU10420 -225 4.5 AATTTTTAGACAACT
Bacillus amyloliquefaciens FZB42 RBAM_010600 -88 4.2 TATATTCAAAAAAAA
Bacillus pumilus SAFR-032 BPUM_0978 -222 5 AATTTTTAGACAATT
Bacillus licheniformis DSM 13 BLi01119 -205 5.3 AATTTTTAGAAAATT
Oceanobacillus iheyensis HTE831 OB1177 -94 4.5 TTTATTCTAAAAATT
Position: -113
Score: 4.6
Sequence: AATTTTCTAAAAACA
Locus tag: OB1212
OB1212 -113 4.6 AATTTTCTAAAAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnB
Ortholog function: Nitrogen regulatory protein P-II
Bacillus licheniformis DSM 13 BLi01176 -103 5 ATTTTTTTGAAAATT
Oceanobacillus iheyensis HTE831 OB1212 -113 4.6 AATTTTCTAAAAACA
Position: -66
Score: 4.8
Sequence: ATTTTTAAGAAAATT
Locus tag: OB1787
OB1787 -66 4.8 ATTTTTAAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndk
Ortholog function: Nucleoside diphosphate kinase (EC 2.7.4.6)
Bacillus licheniformis DSM 13 BLi02408 -74 4.7 AATTGTTTGAAAAAT
Oceanobacillus iheyensis HTE831 OB1787 -66 4.8 ATTTTTAAGAAAATT
Position: -67
Score: 4.4
Sequence: AAAATTCAAAAAATA
Locus tag: OB2122
OB2122 -67 4.4 AAAATTCAAAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lcfA
Ortholog function: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Anoxybacillus flavithermus WK1 Aflv_0564 -56 4.8 AAATTTCAGAAAATA
Bacillus cereus ATCC 14579 BC4526 -277 4.4 AAAAGTCAGAATATT
Oceanobacillus iheyensis HTE831 OB2122 -67 4.4 AAAATTCAAAAAATA
Position: -222
Score: 4.3
Sequence: AAATATTAAAAAATT
Locus tag: OB2168
OB2168 -222 4.3 AAATATTAAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citZ
Ortholog function: Citrate synthase (si) (EC 2.3.3.1)
Bacillus subtilis subsp. subtilis str. 168 BSU29140 -224 4.3 AAATGTCTGATTATT
Bacillus amyloliquefaciens FZB42 RBAM_026180 -224 4.2 ATTAATCAGATTATT
Bacillus pumilus SAFR-032 BPUM_2556 -210 4.3 AAATGTCTGATTATT
Bacillus licheniformis DSM 13 BLi03062 -225 4.5 AAATGTCTGATAATT
Anoxybacillus flavithermus WK1 Aflv_0504 -209 4.3 AAAAGTCTGATAATT
Geobacillus kaustophilus HTA426 GK2736 -201 4.3 AAAAGTCTGATAATT
Oceanobacillus iheyensis HTE831 OB2168 -222 4.3 AAATATTAAAAAATT
Position: -85
Score: 4.6
Sequence: AAATTTCAAAAAATA
Locus tag: OB2221
OB2221 -85 4.6 AAATTTCAAAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Bacillus subtilis subsp. subtilis str. 168 BSU29690 -97 4.6 AATTTTTAAAATATA
Bacillus amyloliquefaciens FZB42 RBAM_026810 -100 4.6 AATTTTTAAAATATA
Bacillus pumilus SAFR-032 BPUM_2617 -93 4.6 AATTTTTAAAAAACT
Bacillus licheniformis DSM 13 BLi03120 -96 4.8 AATTTTTAAAAAATA
Anoxybacillus flavithermus WK1 Aflv_0461 -101 5.1 AATTTTTAAAAAATT
Geobacillus kaustophilus HTA426 GK2807 -112 4.9 AATTTTTAAAATATT
-87 4.4 ACTTTTTTGAAATTT
Bacillus cereus ATCC 14579 BC4660 -110 4.8 AATTTTCAGTATATT
Oceanobacillus iheyensis HTE831 OB2221 -85 4.6 AAATTTCAAAAAATA
Position: -49
Score: 4.5
Sequence: AATTGTTAGAATAAT
Locus tag: OB2303
OB2303 -49 4.5 AATTGTTAGAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltZ
Ortholog function: Proton/glutamate symport protein @ Sodium/glutamate symport protein
Bacillus licheniformis DSM 13 BLi03198 -98 4.5 TATTATTTGAAAATA
Oceanobacillus iheyensis HTE831 OB2303 -49 4.5 AATTGTTAGAATAAT
Position: -58
Score: 4.8
Sequence: AATTTTCAGTATATT
Locus tag: OB2453
OB2453 -58 4.8 AATTTTCAGTATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: appD
Ortholog function: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
Anoxybacillus flavithermus WK1 Aflv_0356 -48 4.7 AATTTTTTGAATTTT
-26 4.5 TATTTTTTTAATATT
Oceanobacillus iheyensis HTE831 OB2453 -58 4.8 AATTTTCAGTATATT
Position: -86
Score: 4.2
Sequence: AATTAATTTAAAATT
Locus tag: OB2628
OB2628 -86 4.2 AATTAATTTAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybgE
Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Bacillus subtilis subsp. subtilis str. 168 BSU02390 -118 4.9 AATATTCTGAAATTT
-38 4.6 AATATTTAAACAATT
Bacillus amyloliquefaciens FZB42 RBAM_002760 -152 4.4 AAAATTTTGATAATT
Bacillus amyloliquefaciens FZB42 RBAM_035750 -48 4.3 TATTTTCAAATAAGT
Bacillus pumilus SAFR-032 BPUM_3500 -226 4.4 AATTGTCAGATTAAT
Position: -96
Score: 4.5
Sequence: TATAATCAGAATATT
Locus tag: OB2643
OB2643 -96 4.5 TATAATCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytcI
Ortholog function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Bacillus pumilus SAFR-032 BPUM_2600 -158 4.6 AATAGTTTGAATATT
Bacillus cereus ATCC 14579 BC4645 -58 4.7 AATTAACTGAAAATT
Oceanobacillus iheyensis HTE831 OB2643 -96 4.5 TATAATCAGAATATT
Position: -40
Score: 4.5
Sequence: AATATAATGAAAATT
Locus tag: OB2833
OB2833 -40 4.5 AATATAATGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpQ
Ortholog function: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
Bacillus licheniformis DSM 13 BLi04156 -91 4.7 AAATTTATGAAAATT
Oceanobacillus iheyensis HTE831 OB2833 -40 4.5 AATATAATGAAAATT
Position: -96
Score: 4.5
Sequence: AATATTCAGATTAAT
Position: -41
Score: 4.5
Sequence: AATTAATAGAAAATT
Locus tag: OB2971
OB2971 -96 4.5 AATATTCAGATTAAT
-41 4.5 AATTAATAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dppA
Ortholog function: D-aminopeptidase (EC 3.4.11.-)
Bacillus subtilis subsp. subtilis str. 168 BSU12920 -43 4.5 ATTTGTTAGAATATT
Bacillus amyloliquefaciens FZB42 RBAM_012770 -58 4.5 ATTTGTTAGAATATT
Bacillus pumilus SAFR-032 BPUM_1184 -55 5 ATTTTTTAGAAAATT
Bacillus licheniformis DSM 13 BLi01392 -61 4.5 ATTTGTTAGAATATT
Oceanobacillus iheyensis HTE831 OB2971 -96 4.5 AATATTCAGATTAAT
-41 4.5 AATTAATAGAAAATT
Position: -112
Score: 4.5
Sequence: TATTTTTACAAAATT
Locus tag: OB3067
OB3067 -112 4.5 TATTTTTACAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dppC
Ortholog function: Oligopeptide ABC transporter permease
Bacillus halodurans C-125 BH0030 -46 4.5 ATTTGTCAAAATATT
Oceanobacillus iheyensis HTE831 OB3067 -112 4.5 TATTTTTACAAAATT
Position: -186
Score: 4.8
Sequence: AATTTTCGGAATATT
Position: -87
Score: 4.7
Sequence: AATTTTTTAAAAAAT
Position: -86
Score: 4.5
Sequence: ATTTTTTAAAAAATA
Position: 4
Score: 4.5
Sequence: AATTGTCAAAAAAGT
Locus tag: OB3071
OB3071 -186 4.8 AATTTTCGGAATATT
-87 4.7 AATTTTTTAAAAAAT
-86 4.5 ATTTTTTAAAAAATA
4 4.5 AATTGTCAAAAAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppA2
Ortholog function: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Bacillus halodurans C-125 BH0031 -295 4.5 AATATTTTGACAAAT
Oceanobacillus iheyensis HTE831 OB0463 -122 4.4 AATTGAAAGAAAATT
Oceanobacillus iheyensis HTE831 OB3071 -186 4.8 AATTTTCGGAATATT
-87 4.7 AATTTTTTAAAAAAT
-86 4.5 ATTTTTTAAAAAATA
Position: -202
Score: 4.6
Sequence: AAATTTCAAAAAATA
Locus tag: OB3099
OB3099 -202 4.6 AAATTTCAAAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltA
Ortholog function: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Bacillus halodurans C-125 BH1728 -94 4.5 AAATGTCAGAAAAAT
Oceanobacillus iheyensis HTE831 OB3099 -202 4.6 AAATTTCAAAAAATA
Position: -101
Score: 4.4
Sequence: AATAATCAGAAAAAA
Locus tag: OB3129
OB3129 -101 4.4 AATAATCAGAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: Argininosuccinate synthase (EC 6.3.4.5)
Bacillus cereus ATCC 14579 BC4630 -108 4.4 AATTGTTTGAAAAAA
Oceanobacillus iheyensis HTE831 OB3129 -101 4.4 AATAATCAGAAAAAA
Position: -264
Score: 4.4
Sequence: AATAGTATGATAATT
Locus tag: OB3328
OB3328 -264 4.4 AATAGTATGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gldA
Ortholog function: Glycerol dehydrogenase (EC 1.1.1.6)
Bacillus amyloliquefaciens FZB42 RBAM_002680 -55 4.5 TATTTTCTGACAAGT
Oceanobacillus iheyensis HTE831 OB3328 -264 4.4 AATAGTATGATAATT
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