Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Exiguobacterium sibiricum 255-15

Type Regulator Effector Pathway Genes Sites
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 3 6
TF BkdR Branched-chain amino acid degradation 1 3
TF CcpA HPr, phosphocarrier protein Carbon catabolism 18 19
TF CcpC Citrate Citrate metabolism 1 1
TF CcpN Gluconeogenesis 1 1
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 13 17
TF CtsR Heat shock Heat shock response 1 1
TF CysL Sulfate; Sulfite; Thiosulfate Sulfite reduction 1 2
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 3 3
TF FapR Malonyl-CoA Fatty acid biosynthesis 2 2
TF Fur Iron ion, (Fe2+) Iron homeostasis 8 12
TF GanR Beta-galactosides Galactan utilization 2 2
TF GlnR Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 2 2
TF HisR Histidine Histidine biosynthesis 1 1
TF HrcA Heat shock Heat shock response 3 3
TF LexA DNA damage SOS response 6 11
TF LiaR LiaS, sensor histidine kinase (bacitracin, nisin, ramoplanin, vancomycin) Cell wall-active antibiotics stress response 1 1
TF MhqR 2-Methylhydroquinone and catechol resistance 2 4
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 1 1
TF MtlR MtlA, mannitol-specific enzyme IICB PTS component; HPr, phosphocarrier protein Mannitol utilization 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 1 1
TF NiaR Niacin NAD biosynthesis 1 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 1
TF PerR Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) Oxidative stress response; Peroxide stress response 5 9
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 8 9
TF Rex NADH Energy metabolism 3 6
TF TnrA NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 15 19
TF TreR Trehalose-6-phosphate Trehalose utilization 1 2
TF YrkD Multidrug resistance 2 2
TF YtrA Ramoplanin Ramoplanin resistance 1 1
TF YybR/YdeP Multidrug resistance 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 1 2
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