Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Fur regulog to Exiguobacterium sibiricum 255-15

Reference regulog properties
Source regulog: Fur - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Exiguobacterium sibiricum 255-15
Orthologous TF(s) Exig_1000
Regulated genes 8
Built upon 200 sites [see more]
Predicted regulatory interactions in Exiguobacterium sibiricum 255-15
Locus tag Position Score Sequence
Position: -56
Score: 6.3
Sequence: AATGATAATCGTTATCAAT
Locus tag: Exig_0193
Exig_0193 -56 6.3 AATGATAATCGTTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfhC
Ortholog function: Putative nitroreductase family protein
Bacillus subtilis subsp. subtilis str. 168 BSU08480 -40 6.5 AATGATAATCATTTTCAAT
Bacillus amyloliquefaciens FZB42 RBAM_008550 -40 6.5 AATGATAATCATTTTCATT
Bacillus pumilus SAFR-032 BPUM_0791 -45 5.9 AATGAGAATCAATTTCAAT
Bacillus licheniformis DSM 13 BLi00873 -33 6.5 AATGATAATCATTTTCATT
Bacillus cereus ATCC 14579 BC0786 -67 6.2 ATTGAAAATCAATATCAAT
Bacillus halodurans C-125 BH0303 -91 6.1 TTTGAAAATGATTATCATT
Bacillus clausii KSM-K16 ABC0928 -80 5.6 AATGAAAATGAGAATCATT
Oceanobacillus iheyensis HTE831 OB0528 -41 6.5 ATTGATAATAATTATCAAT
Position: -61
Score: 5.9
Sequence: ACTGATAATTATTATCAGT
Locus tag: Exig_0842
Exig_0842 -61 5.9 ACTGATAATTATTATCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: Ferrous iron uptake system protein A
Bacillus licheniformis DSM 13 BLi04266 -42 5.9 TATGATAACGATTATCATT
Anoxybacillus flavithermus WK1 Aflv_0305 -38 5.6 ATTGAAAAAGGTTATCATT
Geobacillus kaustophilus HTA426 GK1849 -59 4.8 ATTGAGAAAAAGAATCATT
Bacillus cereus ATCC 14579 BC4807 -39 5.9 TTTGAAAATAATTATCATT
Position: -81
Score: 5.4
Sequence: GTTGATAATCATTTTAATT
Locus tag: Exig_1000
Exig_1000 -81 5.4 GTTGATAATCATTTTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Transcriptional regulator for iron transport and metabolism, Fur family
Bacillus amyloliquefaciens FZB42 RBAM_021640 -118 4.8 TTTTAGAATGATTATCACA
Bacillus pumilus SAFR-032 BPUM_2084 -78 4.7 ATTTAAAATGATTATAGTT
Bacillus licheniformis DSM 13 BLi02503 -119 5 ATTTATAATGATTATTAAA
-79 4.9 ATTTATAATGATTATAGTT
Geobacillus kaustophilus HTA426 GK2317 -102 5.3 TATAATAACCATTATCATT
Bacillus cereus ATCC 14579 BC4091 -101 5.8 TTTGAGAATAATTATCAAT
Bacillus halodurans C-125 BH1527 -103 4.7 ACTAATAATAATTATCTGT
-79 5.4 AATAATAATCATTATTAAT
Bacillus clausii KSM-K16 ABC1780 -102 4.9 AATGATATTCATTTGCAGA
Oceanobacillus iheyensis HTE831 OB1849 -96 4.8 TATTATAATTATTATAATT
Paenibacillus sp. JDR-2 Pjdr2_1270 -77 5.1 AATTATAATCATTCTAAAT
Position: -100
Score: 6.7
Sequence: AATGATAATCATTATCAAT
Locus tag: Exig_1037
Exig_1037 -100 6.7 AATGATAATCATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yclQ
Ortholog function: Iron compound ABC uptake transporter substrate-binding protein
Bacillus cereus ATCC 14579 BC5106 -107 6.5 AATGAAAATGATTATCAAT
Position: -41
Score: 6.5
Sequence: ATTGAAAATGATTATCAAT
Locus tag: Exig_1344
Exig_1344 -41 6.5 ATTGAAAATGATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nikA
Ortholog function: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Bacillus pumilus SAFR-032 BPUM_3070 -40 5.7 AATGAAAATGATTATCAGC
-34 5.1 AATGATTATCAGCATCAAT
Bacillus licheniformis DSM 13 BLi02811 -241 6.3 AATGATTATCATTATCATT
-41 6 AATGAAAATGATTATCAAC
Bacillus halodurans C-125 BH0567 -51 6.1 TTTGAAAATGATTATCATT
-35 4.6 ATTGTTAATTATATTCAGA
Position: -69
Score: 6.3
Sequence: ATTGATAACGATTATCATT
Locus tag: Exig_1611
Exig_1611 -69 6.3 ATTGATAACGATTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: efeM
Ortholog function: lipoprotein binding ferrous or ferric iron for transport
Bacillus subtilis subsp. subtilis str. 168 BSU38270 -34 6.5 AATGATAATCATTTTCAAT
Paenibacillus sp. JDR-2 Pjdr2_0995 -84 6.2 ATTGACAATGATTATCATT
Position: -51
Score: 6
Sequence: ATTGAGAACGATTATCAAT
Locus tag: Exig_2793
Exig_2793 -51 6 ATTGAGAACGATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ykuN
Ortholog function: Flavodoxin
Bacillus subtilis subsp. subtilis str. 168 BSU14150 -71 6.5 AATGAAAATCATTATCATT
-34 6 ATTGAAAATCATTATCAAC
Bacillus amyloliquefaciens FZB42 RBAM_013920 -70 6.5 AATGAAAATCATTATCATT
-33 6.5 AATGAAAATCATTATCAAT
Bacillus pumilus SAFR-032 BPUM_1312 -75 6.5 AATGAAAATCATTATCATT
-38 6.5 ATTGAAAATGATTATCATT
Bacillus cereus ATCC 14579 BC3541 -48 5.9 ATTGAAATTGATTCTCATT
-21 5.5 AATGAGAATGAGAATCATT
Bacillus clausii KSM-K16 ABC1100 -63 6.5 ATTGAAAATGATTATCAAT
-57 6 AATGATTATCAATATCATT
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