Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadR regulog to Exiguobacterium sibiricum 255-15

Reference regulog properties
Source regulog: FadR - Bacillales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Firmicutes
Propagated regulon:
Target genome Exiguobacterium sibiricum 255-15
Orthologous TF(s) Exig_2167
Regulated genes 3
Built upon 48 sites [see more]
Predicted regulatory interactions in Exiguobacterium sibiricum 255-15
Locus tag Position Score Sequence
Position: -73
Score: 6.9
Sequence: ATGAATGAATAGTCATTCAT
Locus tag: Exig_0271
Exig_0271 -73 6.9 ATGAATGAATAGTCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadF
Ortholog function: Fe-S oxidoreductase
Bacillus subtilis subsp. subtilis str. 168 BSU37180 -98 6.3 TTGACTGAACACTCATTCAT
Bacillus amyloliquefaciens FZB42 RBAM_034330 -82 6.3 TTGACTGAACACTCATTCAT
Bacillus pumilus SAFR-032 BPUM_3374 -88 6.6 TTGACTGAATACTCATTCAT
Bacillus licheniformis DSM 13 BLi03969 -82 6.3 TTGACTGAACACTCATTCAT
Anoxybacillus flavithermus WK1 Aflv_2740 -85 6.3 TTGACTGAATGCTCATTCAT
Geobacillus kaustophilus HTA426 GK3398 -106 6.3 TTGACTGAATGCTCATTCAT
Bacillus cereus ATCC 14579 BC5345 -115 5.9 TTGACTGAATGCTCACTCAT
Bacillus halodurans C-125 BH3802 -123 6.5 ATGAGTGAATACTCATTCAT
Bacillus clausii KSM-K16 ABC3892 -109 6.2 CTGACTGAATGCTCATTCAT
Oceanobacillus iheyensis HTE831 OB3014 -106 6.3 TTGACTGAATGATCATTCAT
Position: -40
Score: 6
Sequence: TTGAATGGCTATTCATTCAG
Locus tag: Exig_0944
Exig_0944 -40 6 TTGAATGGCTATTCATTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ykuF
Ortholog function: 2,4-dienoyl-CoA reductase, mitochondrial precursor (EC 1.3.1.34)
Bacillus subtilis subsp. subtilis str. 168 BSU14060 -36 6.4 TTGAATGAATAATCATTCAC
Bacillus amyloliquefaciens FZB42 RBAM_013850 -40 6.8 ATGAATGATTATTCATTCAA
Bacillus pumilus SAFR-032 BPUM_1303 -40 6.7 ATGAATGAATAGTCATTCAA
Bacillus licheniformis DSM 13 BLi01620 -36 6.8 TTGAATGAATACTCATTCAT
Anoxybacillus flavithermus WK1 Aflv_1909 -37 6.5 ATGAATGAATAACCATTCAT
Geobacillus kaustophilus HTA426 GK1044 -34 6.5 ATGAATGAGTAATCAGTCAT
Bacillus cereus ATCC 14579 BC3990 -29 5.2 ATGAATGTGTATTCATTTTT
Bacillus halodurans C-125 BH2144 -38 6.8 TTGAATGAATATTCATTCAA
Position: -43
Score: 6.1
Sequence: ATGAATGAACCATCATTCAT
Locus tag: Exig_2167
Exig_2167 -43 6.1 ATGAATGAACCATCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadR
Ortholog function: Transcriptional regulator of fatty acids degradation, TetR family
Bacillus subtilis subsp. subtilis str. 168 BSU28550 -44 6.9 ATGAATGAATAGTCATTCAT
Bacillus amyloliquefaciens FZB42 RBAM_025610 -38 6.9 ATGAATGAATAGTCATTCAT
Bacillus pumilus SAFR-032 BPUM_2512 -41 6.8 ATGAATGAATACTCATTCAA
Bacillus licheniformis DSM 13 BLi03002 -43 6.9 ATGAATGAGTATTCATTCAT
Anoxybacillus flavithermus WK1 Aflv_0565 -44 6.9 ATGAATGATTATTCATTCAT
Geobacillus kaustophilus HTA426 GK2689 -60 6.1 ATGAATGATGGTTCATTCAT
Bacillus cereus ATCC 14579 BC4525 -45 6.6 ATGAATGACTATTCATTCAG
Bacillus halodurans C-125 BH3102 -38 6.9 ATGAATGAATACTCATTCAT
Bacillus clausii KSM-K16 ABC2672 -45 6.8 ATGAATGAACATTCATTCAT
Oceanobacillus iheyensis HTE831 OB2121 -50 5.9 ATGAATGATCATTCACTCAG