Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CodY regulog to Exiguobacterium sibiricum 255-15

Reference regulog properties
Source regulog: CodY - Bacillales
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode:
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Exiguobacterium sibiricum 255-15
Orthologous TF(s) Exig_1883
Regulated genes 13
Built upon 445 sites [see more]
Predicted regulatory interactions in Exiguobacterium sibiricum 255-15
Locus tag Position Score Sequence
Position: -37
Score: 4.7
Sequence: AATATTCAGAAAAAA
Locus tag: Exig_0339
Exig_0339 -37 4.7 AATATTCAGAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhdG
Ortholog function: Amino acid permease
Bacillus subtilis subsp. subtilis str. 168 BSU09460 -181 4.7 ATTTTTCTAACAATT
Bacillus amyloliquefaciens FZB42 RBAM_009720 -165 4.8 AATTTTCAAAAAAGT
Position: -32
Score: 5.2
Sequence: TATTTTCTGAAAATT
Locus tag: Exig_1689
Exig_1689 -32 5.2 TATTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serC
Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52)
Bacillus amyloliquefaciens FZB42 RBAM_010260 -75 4.4 AAAAATCAAAAAATT
Anoxybacillus flavithermus WK1 Aflv_2293 -91 4.5 TATTTTTTAAAAAAT
-90 4.7 ATTTTTTAAAAAATT
Position: -39
Score: 4.8
Sequence: AATATACAGAAAATT
Locus tag: Exig_1724
Exig_1724 -39 4.8 AATATACAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltA
Ortholog function: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Bacillus halodurans C-125 BH1728 -94 4.5 AAATGTCAGAAAAAT
Oceanobacillus iheyensis HTE831 OB3099 -202 4.6 AAATTTCAAAAAATA
Position: -191
Score: 4.7
Sequence: AATTTTTTGATAATA
Locus tag: Exig_2209
Exig_2209 -191 4.7 AATTTTTTGATAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citZ
Ortholog function: Citrate synthase (si) (EC 2.3.3.1)
Bacillus subtilis subsp. subtilis str. 168 BSU29140 -224 4.3 AAATGTCTGATTATT
Bacillus amyloliquefaciens FZB42 RBAM_026180 -224 4.2 ATTAATCAGATTATT
Bacillus pumilus SAFR-032 BPUM_2556 -210 4.3 AAATGTCTGATTATT
Bacillus licheniformis DSM 13 BLi03062 -225 4.5 AAATGTCTGATAATT
Anoxybacillus flavithermus WK1 Aflv_0504 -209 4.3 AAAAGTCTGATAATT
Geobacillus kaustophilus HTA426 GK2736 -201 4.3 AAAAGTCTGATAATT
Oceanobacillus iheyensis HTE831 OB2168 -222 4.3 AAATATTAAAAAATT
Position: -55
Score: 4.9
Sequence: TTTTTTCTGAAAATT
Locus tag: Exig_2539
Exig_2539 -55 4.9 TTTTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtnE
Ortholog function: Aspartate aminotransferase (EC 2.6.1.1)
Bacillus subtilis subsp. subtilis str. 168 BSU37690 -36 4.7 AATTTACTTAAAATT
Bacillus amyloliquefaciens FZB42 RBAM_034880 -67 4.5 TATTTTCAAATAATA
-26 4.4 TATTTACTTAAAATT
© 2009-2020 RegPrecise