Regulons of Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArsR3		Arsenic resistance	2	2
TF	CooA		Carbon monoxide utilization	1	1
TF	DVU0151		Metabolite transport	1	2
TF	DVU0621	Nitrite	Nitrate and nitrite respiration	6	5
TF	DVU1063		Motility	10	14
TF	DVU1964/DVU1967			2	3
TF	DVU2644		Amino acid metabolism	2	1
TF	DVU2802			1	1
TF	DVU2827		Pyruvate metabolism	2	7
TF	DVU2894		Motility	9	5
TF	Ddes_0528, DESPIG_03026		Nitrosative stress response	2	2
TF	Ddes_1264		Heavy metal resistance	1	2
TF	Ddes_1411/Ddes_2092			6	8
TF	Ddes_1827		Nitrosative stress response	1	1
TF	DvMF_1994		Carbohydrate metabolism	1	1
TF	FliA		Motility	13	6
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	21	20
TF	NikR	Nickel ion, (Ni2+)	Nickel homeostasis	3	2
TF	PdxQ	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	PerR		Peroxide stress response	6	4
TF	PhoB	Inorganic phosphate	Phosphate metabolism	4	2
TF	Rex	NADH	Energy metabolism	16	8
TF	RpoH	Heat shock	Heat shock response	7	2
TF	RpoN		Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism	60	48
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	3	5
TF	TunR	Molybdate; Tungsten	Tungsten homeostasis; Molybdenum homeostasis	7	4
TF	ZraR	Zinc ion, (Zn2+)	Zinc homeostasis	2	1
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	7	3
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	Glycine	Glycine	Glycine metabolism	2	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	3
RNA	mini-ykkC		Multidrug resistance	1	1
RNA	yybP-ykoY			1	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --