Regulon of Cobalamin in Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Desulfovibrionales
Under regulation:
- Genes	6
- Operons	3

Member of regulog collections

By taxonomy - Desulfovibrionales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -138 Score: 102.7 Sequence: ATTTTCTAGACATTG... Locus tag: Ddes_1071 Name: null Funciton: Hypothetical protein
	Ddes_1071		Hypothetical protein
Position: -255 Score: 55.6 Sequence: TGACATTTACCGCGC... Locus tag: Ddes_2334 Name: cbiK2 Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
	Ddes_2334	cbiK2	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Position: -548 Score: 77.4 Sequence: AAAGTATGCGCGGCA... Locus tag: Ddes_0796 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Ddes_0797 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: Ddes_0798 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: Ddes_0799 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	Ddes_0796	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Ddes_0797	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	Ddes_0798	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	Ddes_0799	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD