Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Properties
Regulator type: Transcription factor
TF locus tag: Ddes_2257
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Desulfovibrionales
Statistics of regulated genes:
- Genes 31
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 107 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -209
Score: 4
Sequence: ATTTTTAAATATAAAACAAA
Locus tag: Ddes_0921
Name: dsrA
Funciton: Sulfite reductase alpha subunit (EC 1.8.99.1)
Locus tag: Ddes_0920
Name: dsrB
Funciton: Sulfite reductase beta subunit (EC 1.8.99.1)
Locus tag: Ddes_0919
Name: dsrD
Funciton: Dissimilatory sulfite reductase D
Ddes_0921
dsrA
Sulfite reductase alpha subunit (EC 1.8.99.1)
Ddes_0920
dsrB
Sulfite reductase beta subunit (EC 1.8.99.1)
Ddes_0919
dsrD
Dissimilatory sulfite reductase D
Position: -113
Score: 5
Sequence: CTTGCGAAATTTGTCACCAA
Locus tag: Ddes_2183
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Ddes_2184
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: Ddes_2185
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Ddes_2186
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Ddes_2187
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Ddes_2188
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Ddes_2189
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
Ddes_2183
atpF1
ATP synthase B' chain (EC 3.6.3.14)
Ddes_2184
atpF2
ATP synthase F0, B subunit
Ddes_2185
atpH
ATP synthase delta chain (EC 3.6.3.14)
Ddes_2186
atpA
ATP synthase alpha chain (EC 3.6.3.14)
Ddes_2187
atpG
ATP synthase gamma chain (EC 3.6.3.14)
Ddes_2188
atpD
ATP synthase beta chain (EC 3.6.3.14)
Ddes_2189
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -70
Score: 4.4
Sequence: TTTGTGCTAAAGAGTACAAA
Locus tag: Ddes_0968
Name: ppaC
Funciton: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
Ddes_0968
ppaC
Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
Position: -110
Score: 4.3
Sequence: TTTACTATTTTTTTCACGAT
Locus tag: Ddes_1880
Name: cooM
Funciton: Carbon monoxide-induced hydrogenase membrane protein CooM
Locus tag: Ddes_1881
Name: cooK
Funciton: Carbon monoxide-induced hydrogenase proton translocating subunit CooK @ selenocysteine-containing
Locus tag: Ddes_1882
Name: cooL
Funciton: Carbon monoxide-induced hydrogenase small subunit CooL
Locus tag: Ddes_1883
Name: cooX
Funciton: Carbon monoxide-induced hydrogenase iron-sulfur protein CooX
Locus tag: Ddes_1884
Name: cooU
Funciton: Carbon monoxide-induced hydrogenase NuoC-like protein CooU
Locus tag: Ddes_1885
Name: cooH
Funciton: Carbon monoxide-induced hydrogenase large subunit CooH
Locus tag: Ddes_1886
Name: hypA
Funciton: [NiFe] hydrogenase nickel incorporation protein HypA
Locus tag: Ddes_1887
Name: cooF
Funciton: Carbon monoxide-induced dehydrogenase iron-sulfur protein CooF (EC 1.2.99.2)
Ddes_1880
cooM
Carbon monoxide-induced hydrogenase membrane protein CooM
Ddes_1881
cooK
Carbon monoxide-induced hydrogenase proton translocating subunit CooK @ selenocysteine-containing
Ddes_1882
cooL
Carbon monoxide-induced hydrogenase small subunit CooL
Ddes_1883
cooX
Carbon monoxide-induced hydrogenase iron-sulfur protein CooX
Ddes_1884
cooU
Carbon monoxide-induced hydrogenase NuoC-like protein CooU
Ddes_1885
cooH
Carbon monoxide-induced hydrogenase large subunit CooH
Ddes_1886
hypA
[NiFe] hydrogenase nickel incorporation protein HypA
Ddes_1887
cooF
Carbon monoxide-induced dehydrogenase iron-sulfur protein CooF (EC 1.2.99.2)
Position: -214
Score: 4.6
Sequence: ACTGTGAAAAATATCACCAA
Locus tag: Ddes_1237
Name: dhcA
Funciton: Decaheme cytochrome c associated with Rnf complex
Locus tag: Ddes_1238
Name: rnfC
Funciton: Electron transport complex protein RnfC
Locus tag: Ddes_1239
Name: rnfD
Funciton: Electron transport complex protein RnfD
Locus tag: Ddes_1240
Name: rnfG
Funciton: Electron transport complex protein RnfG
Locus tag: Ddes_1241
Name: rnfE
Funciton: Electron transport complex protein RnfE
Locus tag: Ddes_1242
Name: rnfA
Funciton: Electron transport complex protein RnfA
Locus tag: Ddes_1243
Name: rnfB
Funciton: Electron transport complex protein RnfB
Locus tag: Ddes_1244
Name: null
Funciton: ApbE family lipoprotein
Ddes_1237
dhcA
Decaheme cytochrome c associated with Rnf complex
Ddes_1238
rnfC
Electron transport complex protein RnfC
Ddes_1239
rnfD
Electron transport complex protein RnfD
Ddes_1240
rnfG
Electron transport complex protein RnfG
Ddes_1241
rnfE
Electron transport complex protein RnfE
Ddes_1242
rnfA
Electron transport complex protein RnfA
Ddes_1243
rnfB
Electron transport complex protein RnfB
Ddes_1244
ApbE family lipoprotein
Position: -140
Score: 4.4
Sequence: CTTGTTACTAATTGCGCAAG
Locus tag: Ddes_2130
Name: apsB
Funciton: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Locus tag: Ddes_2129
Name: apsA
Funciton: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Ddes_2130
apsB
Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Ddes_2129
apsA
Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Position: -51
Score: 4.6
Sequence: TGTGTTCTTTTTTGCACAAT
Locus tag: Ddes_1956
Name: adk
Funciton: Adenylate kinase (EC 2.7.4.3)
Ddes_1956
adk
Adenylate kinase (EC 2.7.4.3)
Position: -108
Score: 5.4
Sequence: TTTGTTAGATTATTCACAAG
Locus tag: Ddes_0454
Name: sat
Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Ddes_0454
sat
Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise