Regulon of NikR in Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
| Regulator type: | Transcription factor |
| TF locus tag: | Ddes_1765 |
| Regulator family: | NikR |
| Regulation mode: | repressor |
| Biological process: | Nickel homeostasis |
| Effector: | Nickel ion, (Ni2+) |
| Regulog: | NikR - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By trascription factor - NikR
- By TF family - NikR
- By effector - Nickel ion, (Ni2+)
- By pathway - Nickel homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -85
Score: 7 Sequence: GTGTCAC-(13)-TTGACAC
Locus tag: Ddes_1032
Name: nikA Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: Ddes_1031
Name: nikB Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: Ddes_1030
Name: nikC Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: Ddes_1029
Name: nikD Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) |
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nikA
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Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
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nikB
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Nickel transport system permease protein NikB (TC 3.A.1.5.3)
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nikC
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Nickel transport system permease protein NikC (TC 3.A.1.5.3)
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nikD
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Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
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Position: -93
Score: 5.4 Sequence: TTGCTAC-(13)-GTGTAAC
Locus tag: Ddes_1470
Name: nikK Funciton: Additional periplasmic component NikK of nickel ECF transporter |
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nikK
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Additional periplasmic component NikK of nickel ECF transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |