Regulon of NikR in Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Properties
Regulator type:	Transcription factor
TF locus tag:	Ddes_1765
Regulator family:	NikR
Regulation mode:	repressor
Biological process:	Nickel homeostasis
Effector:	Nickel ion, (Ni2+)
Regulog:	NikR - Desulfovibrionales
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 16 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By trascription factor - NikR
By TF family - NikR
By effector - Nickel ion, (Ni2+)
By pathway - Nickel homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -85 Score: 7 Sequence: GTGTCAC-(13)-TTGACAC Locus tag: Ddes_1032 Name: nikA Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Locus tag: Ddes_1031 Name: nikB Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3) Locus tag: Ddes_1030 Name: nikC Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3) Locus tag: Ddes_1029 Name: nikD Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
	Ddes_1032	nikA	Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
	Ddes_1031	nikB	Nickel transport system permease protein NikB (TC 3.A.1.5.3)
	Ddes_1030	nikC	Nickel transport system permease protein NikC (TC 3.A.1.5.3)
	Ddes_1029	nikD	Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Position: -93 Score: 5.4 Sequence: TTGCTAC-(13)-GTGTAAC Locus tag: Ddes_1470 Name: nikK Funciton: Additional periplasmic component NikK of nickel ECF transporter
	Ddes_1470	nikK	Additional periplasmic component NikK of nickel ECF transporter

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD