Regulons of Comamonas testosteroni KF-1

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	Aave_3430			2	2
TF	Aave_3515			4	3
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	7	5
TF	CueR	Copper ion, (Cu+)	Copper resistance	3	1
TF	Daci_0595		Metabolite transport	3	2
TF	Daci_1890			1	1
TF	Daci_3836			1	1
TF	FadP		Fatty acid degradation	7	3
TF	GguR		Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization	3	3
TF	GntR	Gluconate	Gluconate utilization	2	4
TF	HexR	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	7	2
TF	HrcA	Heat shock	Heat shock response	2	2
TF	HutC	cis-Urocanic acid	Histidine utilization	6	5
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	2
TF	LexA	DNA damage	SOS response	6	6
TF	LiuR		Branched-chain amino acid degradation	7	9
TF	LldR	L-lactate	Lactate utilization	1	2
TF	MerR	Mercury ion, (Hg2+)	Mercury resistance	1	1
TF	MetR	Homocysteine	Methionine biosynthesis	2	2
TF	ModE	Molybdate	Molybdenum homeostasis	2	2
TF	ModE2	Molybdate	Molybdopterin biosynthesis	3	2
TF	NadQ		NAD biosynthesis	2	3
TF	NorR	Nitric oxide	Nitrosative stress response	2	6
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	6	6
TF	PdxR		Pyridoxine/pyridoxal homeostasis	2	1
TF	SdhR		Tricarboxylic acid cycle	3	3
TF	SoxR	Paraquat	Superoxide stress response	3	2
TF	TauR	Taurine	Taurine utilization	3	3
TF	UreR			2	4
TF	VanR	Vanillate	Vanillate utilization	3	3
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	SAH_riboswitch	S-adenosylhomocysteine	Methionine metabolism	2	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	5	3

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --