Regulon of NtrC in Comamonas testosteroni KF-1

Properties
Regulator type:	Transcription factor
TF locus tag:	CtesDRAFT_0728
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Comamonadaceae
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 52 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -261 Score: 5.9 Sequence: TGCACCACATTGGTGCA Position: -238 Score: 4.7 Sequence: TTCGCCAAGATGGTGCA Locus tag: CtesDRAFT_0725 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	CtesDRAFT_0725	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -288 Score: 4.9 Sequence: ATCACCTGTTTGGTGCA Position: -228 Score: 5.6 Sequence: CGCACCATCTTGGTGCA Locus tag: CtesDRAFT_4075 Name: CHP02001 Funciton: Conserved hypothetical protein CHP02001 Locus tag: CtesDRAFT_4074 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: CtesDRAFT_4073 Name: amtB Funciton: Ammonium transporter
	CtesDRAFT_4075	CHP02001	Conserved hypothetical protein CHP02001
	CtesDRAFT_4074	glnK	Nitrogen regulatory protein P-II
	CtesDRAFT_4073	amtB	Ammonium transporter
Position: -219 Score: 4.8 Sequence: TGCACAAAAGCAGTGCA Locus tag: CtesDRAFT_4526 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: CtesDRAFT_4594 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4) Locus tag: CtesDRAFT_4527 Name: nasA Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4) Locus tag: CtesDRAFT_4528 Name: cysG Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
	CtesDRAFT_4526	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	CtesDRAFT_4594	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)
	CtesDRAFT_4527	nasA	Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
	CtesDRAFT_4528	cysG	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Position: -232 Score: 4.5 Sequence: TGCACCAAATATGGGCC Locus tag: CtesDRAFT_4523 Name: nrtA Funciton: Nitrate ABC transporter, substrate-binding component Locus tag: CtesDRAFT_4524 Name: nrtB Funciton: Nitrate ABC transporter, permease component Locus tag: CtesDRAFT_4525 Name: nrtC Funciton: Nitrate ABC transporter, ATP-binding component
	CtesDRAFT_4523	nrtA	Nitrate ABC transporter, substrate-binding component
	CtesDRAFT_4524	nrtB	Nitrate ABC transporter, permease component
	CtesDRAFT_4525	nrtC	Nitrate ABC transporter, ATP-binding component

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD