Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Mycobacterium abscessus ATCC 19977

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AcnR Citrate Tricarboxylic acid cycle 2 2
TF AmtR GlnK-AMP, signal transduction protein Nitrogen metabolism 3 2
TF ArgR Arginine Arginine biosynthesis 1 1
TF ArsR Arsenite; Arsenate Arsenic resistance 2 2
TF BioQ Biotin Biotin biosynthesis 3 3
TF DosR Oxygen; Carbon monoxide; Nitric oxide Dormancy 7 10
TF HrcA Heat shock Heat shock response 3 4
TF HspR Heat shock Heat shock response 3 4
TF LexA DNA damage SOS response 8 10
TF LtbR Leucine biosynthesis 2 4
TF MSMEG_4140 Metabolite transport 1 1
TF Mce2R Fatty acid metabolism 1 1
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 1 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 2 4
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 2 2
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 5 4
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 4 8
TF PdxQ Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis; Metabolite transport 2 2
TF PdxQ3 Pyridoxine/pyridoxal homeostasis 1 1
TF PdxR2 Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 1 1
TF PdxR3 Pyridoxine/pyridoxal homeostasis 1 1
TF PhnF Phosphonate utilization; 2-aminoethylphosphonate utilization 2 4
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 6 7
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 4 2
RNA Glycine Glycine Glycine metabolism 2 1
RNA L10_leader Ribosome biogenesis 1 1
RNA PyrR PyrR Pyrimidine metabolism 1 1
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 1 1
RNA SAM-IV S-adenosylmethionine Sulfur metabolism 2 2
RNA T-box(Ile) Ile-tRNA Amino acid metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
RNA ydaO-yuaA Osmotic stress response; Cell wall metabolism 1 1
RNA ykoK Magnesium ion, (Mg2+) Magnesium homeostasis 1 1
RNA yybP-ykoY 1 1
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