Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Mycobacterium abscessus ATCC 19977

Properties
Regulator type: Transcription factor
TF locus tag: MAB_3038
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Mycobacteriaceae
Statistics of regulated genes:
- Genes 12
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 83 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -8
Score: 5.3
Sequence: TCAAACGCATGTTCGA
Locus tag: MAB_4752
Name: PF02720
Funciton: HNH endonuclease
PF02720
HNH endonuclease

Position: -24
Score: 5.3
Sequence: TCGAACATATGTTCGC
Locus tag: MAB_2868c
Name: splB
Funciton: DNA repair photolyase
splB
DNA repair photolyase

Position: -73
Score: 5.9
Sequence: TCGAACAAATGTTCGA
Locus tag: MAB_3703c
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -82
Score: 5.4
Sequence: TCGAACAACTGTTCTA
Locus tag: MAB_2884c
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: MAB_2883c
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: MAB_2882c
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -41
Score: 5.6
Sequence: TCGAACATATGTTCTA
Locus tag: MAB_3713c
Name: Rv3395c
Funciton: Recombinase-like hypothetical protein
Locus tag: MAB_3712c
Name: COG0389
Funciton: DNA polymerase-like protein PA0670
Rv3395c
Recombinase-like hypothetical protein
COG0389
DNA polymerase-like protein PA0670

Position: -169
Score: 5.5
Sequence: TCGATCATGTGTTCGA
Position: -150
Score: 5.1
Sequence: CCGAACATGTGATCGA
Position: -48
Score: 5.6
Sequence: TCGAACACATGTTTGA
Locus tag: MAB_3038
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -143
Score: 5.2
Sequence: TCGAACAGATGTTCGC
Locus tag: MAB_3060c
Name: recA
Funciton: Recombinase A
Locus tag: MAB_3059c
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -28
Score: 5.5
Sequence: TCGAACGTATGTGCGA
Locus tag: MAB_1120c
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB
DNA repair system specific for alkylated DNA
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD