Regulons of Cellvibrio japonicus Ueda107

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BirA	Biotin	Biotin biosynthesis	3	2
TF	CJA_0601		Hypothetical ABC transporter	1	1
TF	CJA_1242			1	1
TF	CJA_2253		Alkanesulfonates utilization	1	1
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	2	1
TF	CueR	Copper ion, (Cu+)	Copper resistance	4	4
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	6	4
TF	LexA	DNA damage	SOS response	9	4
TF	MetR	Homocysteine	Methionine biosynthesis	2	3
TF	NagR	N-acetylglucosamine	N-acetylglucosamine utilization	8	8
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	3
TF	NsrR	Nitric oxide	Nitrosative stress response	2	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	5	3
TF	RutR	Uracil	Pyrimidine utilization	4	5
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	2	2
TF	YdcR			1	1
TF	YjiR2		Metabolite transport	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	4	3
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --