Regulons of Actinobacillus succinogenes 130Z
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
ArgR |
Arginine |
Arginine biosynthesis |
8 |
14 |
| TF |
CueR |
Copper ion, (Cu+) |
Copper resistance |
2 |
2 |
| TF |
FabR |
Unsaturated acyl-ACP; Unsaturated acyl-CoA |
Fatty acid biosynthesis |
2 |
2 |
| TF |
FadR |
Palmitoyl-CoA; Oleoyl-CoA |
Fatty acid degradation |
2 |
2 |
| TF |
FruR |
Fructose-1-phosphate; Fructose-1,6-diphosphate |
Fructose utilization |
2 |
1 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
9 |
7 |
| TF |
GntR |
Gluconate |
Gluconate utilization |
2 |
4 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
3 |
3 |
| TF |
KdgR |
2-keto-3-deoxygluconate |
Pectin and polygalacturonate utlization |
6 |
8 |
| TF |
LexA |
DNA damage |
SOS response |
11 |
9 |
| TF |
MetJ |
S-adenosylmethionine |
Methionine metabolism; Methionine biosynthesis |
5 |
4 |
| TF |
MetR |
Homocysteine |
Methionine biosynthesis |
5 |
3 |
| TF |
ModE |
Molybdate |
Molybdenum homeostasis |
5 |
3 |
| TF |
NarP |
Nitrite; Nitrate |
Nitrate and nitrite respiration |
20 |
16 |
| TF |
NimR |
Nickel ion, (Ni2+) |
Nickel homeostasis |
2 |
2 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
3 |
5 |
| TF |
PurR |
Hypoxanthine; Guanine |
Purine metabolism |
12 |
9 |
| TF |
RbsR |
Ribose |
Ribose utilization |
1 |
1 |
| TF |
TrpR |
Tryptophan |
Tryptophan biosynthesis |
6 |
5 |
| TF |
TyrR |
Tyrosine; Phenylalanine |
Aromatic amino acid metabolism |
3 |
2 |
| TF |
UxuR |
Glucuronate |
Glucuronate utilization |
4 |
5 |
| RNA |
FMN |
Flavin mononucleotide |
Riboflavin biosynthesis |
5 |
1 |
| RNA |
Glycine |
Glycine |
Glycine metabolism |
1 |
2 |
| RNA |
His_leader |
|
Histidine biosynthesis |
3 |
1 |
| RNA |
MOCO_RNA_motif |
Molybdenum |
Molybdopterin biosynthesis; Molybdenum homeostasis |
2 |
1 |
| RNA |
PreQ1 |
Pre-queuosine1 |
Queuosine biosynthesis |
1 |
1 |
| RNA |
S15 |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
3 |
3 |
| RNA |
Thr_leader |
|
Threonine biosynthesis |
1 |
1 |
Export
|
Regulated Genes
|
[ Tab delimited format ]
|
DOWNLOAD
|
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
