Regulons of Actinobacillus succinogenes 130Z

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArgR	Arginine	Arginine biosynthesis	8	14
TF	CueR	Copper ion, (Cu+)	Copper resistance	2	2
TF	FabR	Unsaturated acyl-ACP; Unsaturated acyl-CoA	Fatty acid biosynthesis	2	2
TF	FadR	Palmitoyl-CoA; Oleoyl-CoA	Fatty acid degradation	2	2
TF	FruR	Fructose-1-phosphate; Fructose-1,6-diphosphate	Fructose utilization	2	1
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	9	7
TF	GntR	Gluconate	Gluconate utilization	2	4
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	3	3
TF	KdgR	2-keto-3-deoxygluconate	Pectin and polygalacturonate utlization	6	8
TF	LexA	DNA damage	SOS response	11	9
TF	MetJ	S-adenosylmethionine	Methionine metabolism; Methionine biosynthesis	5	4
TF	MetR	Homocysteine	Methionine biosynthesis	5	3
TF	ModE	Molybdate	Molybdenum homeostasis	5	3
TF	NarP	Nitrite; Nitrate	Nitrate and nitrite respiration	20	16
TF	NimR	Nickel ion, (Ni2+)	Nickel homeostasis	2	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	3	5
TF	PurR	Hypoxanthine; Guanine	Purine metabolism	12	9
TF	RbsR	Ribose	Ribose utilization	1	1
TF	TrpR	Tryptophan	Tryptophan biosynthesis	6	5
TF	TyrR	Tyrosine; Phenylalanine	Aromatic amino acid metabolism	3	2
TF	UxuR	Glucuronate	Glucuronate utilization	4	5
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	5	1
RNA	Glycine	Glycine	Glycine metabolism	1	2
RNA	His_leader		Histidine biosynthesis	3	1
RNA	MOCO_RNA_motif	Molybdenum	Molybdopterin biosynthesis; Molybdenum homeostasis	2	1
RNA	PreQ1	Pre-queuosine1	Queuosine biosynthesis	1	1
RNA	S15		Ribosome biogenesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	3
RNA	Thr_leader		Threonine biosynthesis	1	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --