Regulon of KdgR in Actinobacillus succinogenes 130Z

Properties
Regulator type:	Transcription factor
TF locus tag:	Asuc_1475
Regulator family:	IclR
Regulation mode:	repressor
Biological process:	Pectin and polygalacturonate utlization
Effector:	2-keto-3-deoxygluconate
Regulog:	KdgR - Pasteurellales
Statistics of regulated genes:
- Genes	13
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By trascription factor - KdgR
By taxonomy - Pasteurellales
By TF family - IclR
By effector - 2-keto-3-deoxygluconate
By pathway - Pectin and polygalacturonate utlization

Regulated operons
	Locus Tag	Name	Function
Position: -117 Score: 5.8 Sequence: TATTAAAATAATGTTTCAAAA Position: -73 Score: 5.2 Sequence: AAATAAAATTGTGTTATATTA Locus tag: Asuc_1469 Name: pelX Funciton: Exopolygalacturonate lyase (EC 4.2.2.9)
	Asuc_1469	pelX	Exopolygalacturonate lyase (EC 4.2.2.9)
Position: -102 Score: 5 Sequence: ATTAAAAATAAAATTTTGTTT Position: -97 Score: 5.8 Sequence: AAATAAAATTTTGTTTCAAAA Locus tag: Asuc_1468 Name: togX Funciton: predicted oligogalacturonate transporter Locus tag: Asuc_1467 Name: ogl Funciton: Oligogalacturonate lyase (EC 4.2.2.6)
	Asuc_1468	togX	predicted oligogalacturonate transporter
	Asuc_1467	ogl	Oligogalacturonate lyase (EC 4.2.2.6)
Position: -153 Score: 5.5 Sequence: ATTCAAAACATAATTTCATTT Locus tag: Asuc_1923 Name: oglP Funciton: predicted oligogalacturonate TRAP transporter, substrate-binding subunit Locus tag: Asuc_1922 Name: oglQ Funciton: predicted oligogalacturonate TRAP transporter, small transmembrane subunit Locus tag: Asuc_1921 Name: oglM Funciton: predicted oligogalacturonate TRAP transporter, large transmembrane subunit
	Asuc_1923	oglP	predicted oligogalacturonate TRAP transporter, substrate-binding subunit
	Asuc_1922	oglQ	predicted oligogalacturonate TRAP transporter, small transmembrane subunit
	Asuc_1921	oglM	predicted oligogalacturonate TRAP transporter, large transmembrane subunit
Position: -148 Score: 5.4 Sequence: TTTTAAAACCATATTTCAATT Locus tag: Asuc_1477 Name: oglO Funciton: predicted oligogalacturonate-specific outer membrane porin
	Asuc_1477	oglO	predicted oligogalacturonate-specific outer membrane porin
Position: -122 Score: 5.4 Sequence: AATTGAAATTGTATTTCAGAA Locus tag: Asuc_1474 Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) Locus tag: Asuc_1473 Name: spiX Funciton: predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) Locus tag: Asuc_1472 Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) Locus tag: Asuc_1471 Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) Locus tag: Asuc_1470 Name: kdgF Funciton: Pectin degradation protein
	Asuc_1474	kduD	2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
	Asuc_1473	spiX	predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
	Asuc_1472	kdgK	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
	Asuc_1471	eda	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
	Asuc_1470	kdgF	Pectin degradation protein
Position: -126 Score: 5.4 Sequence: TTCTGAAATACAATTTCAATT Locus tag: Asuc_1475 Name: kdgR Funciton: 2-keto-3-deoxygluconate regulator, IclR family
	Asuc_1475	kdgR	2-keto-3-deoxygluconate regulator, IclR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD