Regulon of NarP in Actinobacillus succinogenes 130Z
| Regulator type: | Transcription factor |
| TF locus tag: | Asuc_0362 |
| Regulator family: | LuxR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrate and nitrite respiration |
| Effector: | Nitrite; Nitrate |
| Regulog: | NarP - Pasteurellales |
| Statistics of regulated genes: | |
| - Genes | 47 |
| - Operons | 14 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pasteurellales
- By trascription factor - NarP
- By TF family - LuxR
- By effector - Nitrite
- By effector - Nitrate
- By pathway - Nitrate and nitrite respiration
| Locus Tag | Name | Function | |
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Position: -121
Score: 3.7 Sequence: TAGTTAAAAAGAGGTA
Locus tag: Asuc_1813
Name: frdA Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: Asuc_1814
Name: frdB Funciton: Fumarate reductase subunit B (EC 1.3.5.4)
Locus tag: Asuc_1815
Name: frdC Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: Asuc_1816
Name: frdD Funciton: Fumarate reductase subunit D (EC 1.3.5.4) |
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frdA
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Fumarate reductase subunit A (EC 1.3.5.4)
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frdB
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Fumarate reductase subunit B (EC 1.3.5.4)
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frdC
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Fumarate reductase subunit C (EC 1.3.5.4)
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frdD
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Fumarate reductase subunit D (EC 1.3.5.4)
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Position: -39
Score: 3.7 Sequence: TACCCAGTTCAAGTTA
Locus tag: Asuc_1612
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) |
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mdh
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Malate dehydrogenase (EC 1.1.1.37)
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Position: -78
Score: 4.5 Sequence: TAACATTTTTTAGGTA
Locus tag: Asuc_0221
Name: pckA Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
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pckA
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Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
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Position: -152
Score: 4.3 Sequence: TACCTCATAATAAGTA
Locus tag: Asuc_0352
Name: hcp Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: Asuc_0351
Name: hcr Funciton: NADH oxidoreductase hcr (EC 1.-.-.-) |
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hcp
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Hydroxylamine reductase (EC 1.7.-.-)
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hcr
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NADH oxidoreductase hcr (EC 1.-.-.-)
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Position: -93
Score: 4.8 Sequence: TACCTCTAAATGGTTA
Locus tag: Asuc_0843
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: Asuc_0844
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: Asuc_0845
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: Asuc_0846
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: Asuc_0847
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: Asuc_0848
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: Asuc_0849
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: Asuc_0850
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: Asuc_0851
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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ccmA
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ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
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ccmB
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ABC transporter involved in cytochrome c biogenesis, CcmB subunit
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ccmC
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Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
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ccmD
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Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
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ccmE
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Cytochrome c-type biogenesis protein CcmE, heme chaperone
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ccmF
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Cytochrome c heme lyase, subunit CcmF
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ccmG
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Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
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ccmH
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Cytochrome c heme lyase, subunit CcmH
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ccmH
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Cytochrome c heme lyase, subunit CcmH
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Position: -139
Score: 4.3 Sequence: TACCTATTTTTGAGTG
Locus tag: Asuc_1602
Name: norB Funciton: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
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norB
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Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
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Position: -69
Score: 4.5 Sequence: TACCTCTAAAGAAGTA
Locus tag: Asuc_0591
Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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adhE
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Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
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Position: -146
Score: 3.7 Sequence: TTCTCATTTATAATTA
Locus tag: Asuc_1277
Name: hybO Funciton: Hydrogenase II, small subunit (EC 1.12.99.6)
Locus tag: Asuc_1278
Name: hybA Funciton: Hydrogenase II, FeS ferredoxin-type component (EC 1.12.99.6)
Locus tag: Asuc_1279
Name: hybB Funciton: Hydrogenase II, cytochrome b type component (EC 1.12.99.6)
Locus tag: Asuc_1280
Name: hybC Funciton: Hydrogenase II, large subunit (EC 1.12.99.6)
Locus tag: Asuc_1281
Name: hybD Funciton: Hydrogenase II, predicted maturation peptidase (EC 1.12.99.6)
Locus tag: Asuc_1282
Name: hybE Funciton: Hydrogenase II, maturation chaperone (EC 1.12.99.6)
Locus tag: Asuc_1283
Name: hybG Funciton: Hydrogenase II, accessory protein (EC 1.12.99.6) |
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hybO
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Hydrogenase II, small subunit (EC 1.12.99.6)
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hybA
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Hydrogenase II, FeS ferredoxin-type component (EC 1.12.99.6)
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hybB
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Hydrogenase II, cytochrome b type component (EC 1.12.99.6)
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hybC
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Hydrogenase II, large subunit (EC 1.12.99.6)
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hybD
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Hydrogenase II, predicted maturation peptidase (EC 1.12.99.6)
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hybE
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Hydrogenase II, maturation chaperone (EC 1.12.99.6)
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hybG
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Hydrogenase II, accessory protein (EC 1.12.99.6)
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Position: -47
Score: 4.4 Sequence: TACCCCTATTGGGGTG
Locus tag: Asuc_1915
Name: torY Funciton: Biotin sulfoxide reductase, cytochrome c-type
Locus tag: Asuc_1914
Name: torZ Funciton: Biotin sulfoxide reductase |
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torY
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Biotin sulfoxide reductase, cytochrome c-type
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torZ
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Biotin sulfoxide reductase
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Position: -42
Score: 4.2 Sequence: TACCCCATATTAGGGA
Locus tag: Asuc_0879
Name: arcA Funciton: Anaerobic metabolism transcriptional regulator arcA, OmpR family |
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arcA
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Anaerobic metabolism transcriptional regulator arcA, OmpR family
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Position: -76
Score: 4.2 Sequence: TACCCCATGATAGGTA
Locus tag: Asuc_2040
Name: napF Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Locus tag: Asuc_2039
Name: napD Funciton: Periplasmic nitrate reductase component NapD
Locus tag: Asuc_2038
Name: napA Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Asuc_2037
Name: napG Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: Asuc_2036
Name: napH Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: Asuc_2035
Name: napB Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: Asuc_2034
Name: napC Funciton: Cytochrome c-type protein NapC |
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napF
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Periplasmic nitrate reductase, ferredoxin-type protein NapF
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napD
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Periplasmic nitrate reductase component NapD
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napA
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Periplasmic nitrate reductase precursor (EC 1.7.99.4)
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napG
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Periplasmic nitrate reductase, ferredoxin-type protein NapG
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napH
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Periplasmic nitrate reductase, polyferredoxin NapH
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napB
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Nitrate reductase cytochrome c550-type subunit
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napC
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Cytochrome c-type protein NapC
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Position: -377
Score: 4.7 Sequence: TAACTTATTATAGTTA
Position: -321
Score: 4.6 Sequence: TACCTATTGTTAGGTA
Locus tag: Asuc_0704
Name: nrfA Funciton: Nitrite reductase, cytochrome c(552)
Locus tag: Asuc_0705
Name: nrfB Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: Asuc_0706
Name: nrfC Funciton: Nitrite reductase, Fe-S center subunit
Locus tag: Asuc_0707
Name: nrfD Funciton: Nitrite reductase, NrfD component
Locus tag: Asuc_0708
Name: nrfE Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
Locus tag: Asuc_0709
Name: nrfX Funciton: Nitrite reductase, predicted component NrfX
Locus tag: Asuc_0710
Name: nrfF Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF
Locus tag: Asuc_0711
Name: nrfG Funciton: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
Locus tag: Asuc_0712
Name: yhiN Funciton: Predicted oxydoreductase |
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nrfA
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Nitrite reductase, cytochrome c(552)
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nrfB
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Cytochrome c-type protein NrfB precursor
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nrfC
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Nitrite reductase, Fe-S center subunit
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nrfD
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Nitrite reductase, NrfD component
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nrfE
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Nitrite reductase, cytochrome c-type heme lyase subunit nrfE
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nrfX
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Nitrite reductase, predicted component NrfX
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nrfF
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Nitrite reductase, cytochrome c-type heme lyase subunit nrfF
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nrfG
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Nitrite reductase, cytochrome c-type heme lyase subunit nrfG
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yhiN
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Predicted oxydoreductase
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Position: -52
Score: 4.2 Sequence: TACTATATTTGAGTTA
Position: -34
Score: 3.9 Sequence: TACCCATTTTAGATTA
Locus tag: Asuc_2051
Name: eno Funciton: Enolase (EC 4.2.1.11) |
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eno
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Enolase (EC 4.2.1.11)
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Position: -134
Score: 4.3 Sequence: TACCTAGATAGAGTGA
Locus tag: Asuc_1970
Name: lctP Funciton: L-lactate permease |
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lctP
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L-lactate permease
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |