Regulons of Sphingomonas wittichii RW1

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ELI_12480		Multidrug resistance; Multidrug efflux	4	3
TF	FnrN	Oxygen	Oxidative stress response; Nitrogen fixation	3	1
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	15	10
TF	HrcA	Heat shock	Heat shock response	1	1
TF	HutC	cis-Urocanic acid	Histidine utilization	2	2
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	LexA	DNA damage	SOS response	10	9
TF	LiuR		Branched-chain amino acid degradation	19	1
TF	MerR	Mercury ion, (Hg2+)	Mercury resistance	1	1
TF	ModE2	Molybdate	Molybdenum homeostasis	1	1
TF	NnrR	Nitric oxide	Denitrification	2	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	3
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	4	4
TF	PdxQ2	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis; Metabolite transport	2	2
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	4	4
TF	Swit_4344			1	1
TF	YrdX3			2	2
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	4	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	1	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --