Regulons of Sphingomonas wittichii RW1
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
ELI_12480 |
|
Multidrug resistance; Multidrug efflux |
4 |
3 |
| TF |
FnrN |
Oxygen |
Oxidative stress response; Nitrogen fixation |
3 |
1 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
15 |
10 |
| TF |
HrcA |
Heat shock |
Heat shock response |
1 |
1 |
| TF |
HutC |
cis-Urocanic acid |
Histidine utilization |
2 |
2 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
1 |
1 |
| TF |
LexA |
DNA damage |
SOS response |
10 |
9 |
| TF |
LiuR |
|
Branched-chain amino acid degradation |
19 |
1 |
| TF |
MerR |
Mercury ion, (Hg2+) |
Mercury resistance |
1 |
1 |
| TF |
ModE2 |
Molybdate |
Molybdenum homeostasis |
1 |
1 |
| TF |
NnrR |
Nitric oxide |
Denitrification |
2 |
2 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
2 |
3 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
4 |
4 |
| TF |
PdxQ2 |
Pyridoxal-5-phosphate |
Pyridoxine/pyridoxal homeostasis; Metabolite transport |
2 |
2 |
| TF |
SahR |
S-adenosylhomocysteine |
Methionine metabolism |
4 |
4 |
| TF |
Swit_4344 |
|
|
1 |
1 |
| TF |
YrdX3 |
|
|
2 |
2 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
4 |
2 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
1 |
1 |
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