Regulon of SahR in Sphingomonas wittichii RW1
| Regulator type: | Transcription factor |
| TF locus tag: | Swit_2402 |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Methionine metabolism |
| Effector: | S-adenosylhomocysteine |
| Regulog: | SahR - Sphingomonadales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Sphingomonadales
- By trascription factor - SahR/SamR
- By TF family - ArsR
- By effector - S-adenosylhomocysteine
- By pathway - Methionine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -79
Score: 5.7 Sequence: ATATAACGAAGTCTTTATAT
Locus tag: Swit_3373
Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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metK
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S-adenosylmethionine synthetase (EC 2.5.1.6)
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Position: -102
Score: 6.3 Sequence: ATATAAAGAAACCTTTATAT
Locus tag: Swit_2674
Name: ahcY Funciton: Adenosylhomocysteinase (EC 3.3.1.1) |
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ahcY
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Adenosylhomocysteinase (EC 3.3.1.1)
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Position: -558
Score: 6.3 Sequence: ATATAAAGTTTTCTTTATAT
Locus tag: Swit_4786
Name: null Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Position: -16
Score: 6.7 Sequence: ATATAAAGATTTCTTTATGT
Locus tag: Swit_2402
Name: sahR Funciton: Transcriptional regulator of methionine metabolism, ArsR family
Locus tag: Swit_2401
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Locus tag: Swit_2400
Name: metH2 Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Locus tag: Swit_2399
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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sahR
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Transcriptional regulator of methionine metabolism, ArsR family
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metF
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
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metH2
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |