Regulon of Fur in Sphingomonas wittichii RW1

Properties
Regulator type:	Transcription factor
TF locus tag:	Swit_2385
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Sphingomonadales
Statistics of regulated genes:
- Genes	32
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 74 sites [see more]

Member of regulog collections

By taxonomy - Sphingomonadales
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -62 Score: 5.6 Sequence: ATTGCGATTGACTCGCAAT Locus tag: Swit_2730 Name: null Funciton: Hypothetical protein
	Swit_2730		Hypothetical protein
Position: -56 Score: 5.3 Sequence: ATTGCGATTGATTTGCACT Locus tag: Swit_4047 Name: tonB Funciton: Ferric siderophore transport system, periplasmic binding protein TonB Locus tag: Swit_4046 Name: piuC Funciton: Iron-uptake factor PiuC
	Swit_4047	tonB	Ferric siderophore transport system, periplasmic binding protein TonB
	Swit_4046	piuC	Iron-uptake factor PiuC
Position: -19 Score: 4.8 Sequence: ATTGATAATCACTCGCAGC Locus tag: Swit_2450 Name: feoA Funciton: Ferrous iron transport protein A Locus tag: Swit_2451 Name: feoB Funciton: Ferrous iron transport protein B
	Swit_2450	feoA	Ferrous iron transport protein A
	Swit_2451	feoB	Ferrous iron transport protein B
Position: -50 Score: 4.7 Sequence: ATTGATAGTCAGTTGCAAT Locus tag: Swit_3138 Name: bfd Funciton: Bacterioferritin-associated ferredoxin Locus tag: Swit_3139 Name: bfr Funciton: Bacterioferritin
	Swit_3138	bfd	Bacterioferritin-associated ferredoxin
	Swit_3139	bfr	Bacterioferritin
Position: -72 Score: 5.1 Sequence: ATTGCGTTTGATTCGCATT Locus tag: Swit_3561 Name: omp3 Funciton: TonB-dependent siderophore receptor Locus tag: Swit_3560 Name: omp2 Funciton: TonB-dependent siderophore receptor
	Swit_3561	omp3	TonB-dependent siderophore receptor
	Swit_3560	omp2	TonB-dependent siderophore receptor
Position: -104 Score: 5.5 Sequence: GTTGCGAATCATTCTCACT Locus tag: Swit_2982 Name: nuoA Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) Locus tag: Swit_2983 Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) Locus tag: Swit_2984 Name: nuoC Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) Locus tag: Swit_2985 Name: nuoD Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) Locus tag: Swit_2986 Name: nuoE Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) Locus tag: Swit_2987 Name: null Funciton: Hypothetical protein Locus tag: Swit_2988 Name: nuoF Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) Locus tag: Swit_2989 Name: null Funciton: Hypothetical protein Locus tag: Swit_2990 Name: null Funciton: Hypothetical protein Locus tag: Swit_2991 Name: nuoG Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) Locus tag: Swit_2992 Name: nuoH Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) Locus tag: Swit_2993 Name: nuoI Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) Locus tag: Swit_2994 Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) Locus tag: Swit_2995 Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) Locus tag: Swit_2996 Name: nuoL Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Locus tag: Swit_2997 Name: nuoM Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) Locus tag: Swit_2998 Name: nuoN Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
	Swit_2982	nuoA	NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
	Swit_2983	nuoB	NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
	Swit_2984	nuoC	NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
	Swit_2985	nuoD	NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
	Swit_2986	nuoE	NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
	Swit_2987		Hypothetical protein
	Swit_2988	nuoF	NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
	Swit_2989		Hypothetical protein
	Swit_2990		Hypothetical protein
	Swit_2991	nuoG	NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
	Swit_2992	nuoH	NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
	Swit_2993	nuoI	NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
	Swit_2994	nuoJ	NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
	Swit_2995	nuoK	NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
	Swit_2996	nuoL	NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
	Swit_2997	nuoM	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
	Swit_2998	nuoN	NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
Position: -85 Score: 4.9 Sequence: AATGAGAATCATTCTCAGA Position: -61 Score: 5.1 Sequence: TTTGCGATTCATTTTCAAT Locus tag: Swit_3225 Name: omp4 Funciton: TonB-dependent siderophore receptor
	Swit_3225	omp4	TonB-dependent siderophore receptor
Position: -96 Score: 5.2 Sequence: ATTGGGAATCGTTCGCACT Locus tag: Swit_3823 Name: hemA Funciton: 5-aminolevulinate synthase (EC 2.3.1.37)
	Swit_3823	hemA	5-aminolevulinate synthase (EC 2.3.1.37)
Position: -93 Score: 5.8 Sequence: ATTGCGAACAGTTCGCATT Locus tag: Swit_0430 Name: PF03929 Funciton: PepSY-associated TM helix domain protein Locus tag: Swit_0429 Name: COG3656 Funciton: Periplasmic-like protein Locus tag: Swit_0428 Name: null Funciton: Putative exported protein Locus tag: Swit_0427 Name: apbE Funciton: ApbE family lipoprotein
	Swit_0430	PF03929	PepSY-associated TM helix domain protein
	Swit_0429	COG3656	Periplasmic-like protein
	Swit_0428		Putative exported protein
	Swit_0427	apbE	ApbE family lipoprotein

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Sphingomonas wittichii RW1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --