Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Sphingomonas wittichii RW1

Properties
Regulator type: Transcription factor
TF locus tag: Swit_3216
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Sphingomonadales
Statistics of regulated genes:
- Genes 12
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 61 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -39
Score: 5.3
Sequence: GTTCCCCAATCGTTC
Locus tag: Swit_3565
Name: yoaA
Funciton: DinG family ATP-dependent helicase YoaA
yoaA
DinG family ATP-dependent helicase YoaA

Position: -15
Score: 0.9
Sequence: GAACAAAAATAGAAC
Locus tag: Swit_1121
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: Swit_1120
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: Swit_1119
Name: dnaE2
Funciton: DNA polymerase III alpha chain
imuA
Predicted RecA/RadA recombinase
imuB
DNA polymerase-like protein PA0670
dnaE2
DNA polymerase III alpha chain

Position: -44
Score: 4.9
Sequence: GTTGCCTAAATGTTC
Locus tag: Swit_3216
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -9
Score: 4.8
Sequence: GTTCCCGCAATGTTC
Locus tag: Swit_2823
Name: PF06319
Funciton: Conserved hypothetical protein
PF06319
Conserved hypothetical protein

Position: -20
Score: 4.6
Sequence: GTTCATGATATGTTC
Locus tag: Swit_4095
Name: PF04055
Funciton: Radical SAM domain protein
PF04055
Radical SAM domain protein

Position: -28
Score: 4.2
Sequence: GTTCTTGGTTCGTTC
Locus tag: Swit_4092
Name: radA
Funciton: DNA repair protein RadA
Locus tag: Swit_4093
Name: cvpA
Funciton: Colicin V production protein
radA
DNA repair protein RadA
cvpA
Colicin V production protein

Position: -28
Score: 4.7
Sequence: GTTCCCATTCTGTTC
Locus tag: Swit_0232
Name: rmuC
Funciton: DNA recombination protein RmuC
rmuC
DNA recombination protein RmuC

Position: -25
Score: 0.8
Sequence: GAACAAATCTGGAAC
Locus tag: Swit_3107
Name: uvrA
Funciton: Excinuclease ABC subunit A
uvrA
Excinuclease ABC subunit A

Position: -89
Score: 5
Sequence: GTTCTCCCCTTGTTC
Locus tag: Swit_0512
Name: recA
Funciton: Recombinase A
recA
Recombinase A
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