Regulon of LexA in Sphingomonas wittichii RW1

Properties
Regulator type:	Transcription factor
TF locus tag:	Swit_3216
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Sphingomonadales
Statistics of regulated genes:
- Genes	12
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 61 sites [see more]

Member of regulog collections

By taxonomy - Sphingomonadales
By trascription factor - LexA
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -39 Score: 5.3 Sequence: GTTCCCCAATCGTTC Locus tag: Swit_3565 Name: yoaA Funciton: DinG family ATP-dependent helicase YoaA
	Swit_3565	yoaA	DinG family ATP-dependent helicase YoaA
Position: -15 Score: 0.9 Sequence: GAACAAAAATAGAAC Locus tag: Swit_1121 Name: imuA Funciton: Predicted RecA/RadA recombinase Locus tag: Swit_1120 Name: imuB Funciton: DNA polymerase-like protein PA0670 Locus tag: Swit_1119 Name: dnaE2 Funciton: DNA polymerase III alpha chain
	Swit_1121	imuA	Predicted RecA/RadA recombinase
	Swit_1120	imuB	DNA polymerase-like protein PA0670
	Swit_1119	dnaE2	DNA polymerase III alpha chain
Position: -44 Score: 4.9 Sequence: GTTGCCTAAATGTTC Locus tag: Swit_3216 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	Swit_3216	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -9 Score: 4.8 Sequence: GTTCCCGCAATGTTC Locus tag: Swit_2823 Name: PF06319 Funciton: Conserved hypothetical protein
	Swit_2823	PF06319	Conserved hypothetical protein
Position: -20 Score: 4.6 Sequence: GTTCATGATATGTTC Locus tag: Swit_4095 Name: PF04055 Funciton: Radical SAM domain protein
	Swit_4095	PF04055	Radical SAM domain protein
Position: -28 Score: 4.2 Sequence: GTTCTTGGTTCGTTC Locus tag: Swit_4092 Name: radA Funciton: DNA repair protein RadA Locus tag: Swit_4093 Name: cvpA Funciton: Colicin V production protein
	Swit_4092	radA	DNA repair protein RadA
	Swit_4093	cvpA	Colicin V production protein
Position: -28 Score: 4.7 Sequence: GTTCCCATTCTGTTC Locus tag: Swit_0232 Name: rmuC Funciton: DNA recombination protein RmuC
	Swit_0232	rmuC	DNA recombination protein RmuC
Position: -25 Score: 0.8 Sequence: GAACAAATCTGGAAC Locus tag: Swit_3107 Name: uvrA Funciton: Excinuclease ABC subunit A
	Swit_3107	uvrA	Excinuclease ABC subunit A
Position: -89 Score: 5 Sequence: GTTCTCCCCTTGTTC Locus tag: Swit_0512 Name: recA Funciton: Recombinase A
	Swit_0512	recA	Recombinase A

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Sphingomonas wittichii RW1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --