Regulon of NtrC in Sphingomonas wittichii RW1

Properties
Regulator type:	Transcription factor
TF locus tag:	Swit_0247
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Sphingomonadales
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 25 sites [see more]

Member of regulog collections

By taxonomy - Sphingomonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -145 Score: 5.4 Sequence: TGCCCATTTTTCAGGCA Locus tag: Swit_4832 Name: glnB Funciton: Glutamate synthase, large chain (EC 1.4.1.13) Locus tag: Swit_4831 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Swit_4832	glnB	Glutamate synthase, large chain (EC 1.4.1.13)
	Swit_4831	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -27 Score: 4.9 Sequence: TGCCGCTTTTTTAGGCA Locus tag: Swit_0245 Name: nifR3 Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family Locus tag: Swit_0246 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Swit_0247 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Swit_0245	nifR3	Nitrogen assimilation transcriptional regulator NtrX, Fis family
	Swit_0246	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Swit_0247	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -159 Score: 5.4 Sequence: TGCCTAAAAAACGGGCA Position: -141 Score: 4 Sequence: GGCTCAACTTTTAGACA Locus tag: Swit_1918 Name: glnK Funciton: Nitrogen regulatory protein P-II Locus tag: Swit_1917 Name: amtB Funciton: Ammonium transporter
	Swit_1918	glnK	Nitrogen regulatory protein P-II
	Swit_1917	amtB	Ammonium transporter

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD