Profile of regulator NtrC in Sphingomonadales
Properties
| Regulator family: |
Fis |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Nitrogen assimilation |
| Effector: |
Phosphorylated NtrB, signal histidine kinase |
| Regulog: |
NtrC - Sphingomonadales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Erythrobacter litoralis HTCC2594
|
|
ELI_13865 |
glnK |
-134 |
4.8 |
TGCGTATTCTTTGGGCA |
|
ELI_13865 |
glnK |
-152 |
4.7 |
TGACTAAAAATTAGGCC |
|
ELI_01665 |
glnB |
-237 |
5.8 |
TGCCTAAATTTTAAGCA |
|
ELI_06285 |
nifR3 |
-31 |
5.9 |
TGCCCAAATTTTAGGCA |
|
Erythrobacter sp. NAP1
|
|
NAP1_00830 |
glnB |
-208 |
5.9 |
TGCCCAAAATTTAGGCA |
|
NAP1_12238 |
glnK |
-164 |
4.6 |
TGCTCAAAAAATAAACA |
|
NAP1_12238 |
glnK |
-145 |
4.2 |
TGATTAAACCTTAGGCA |
|
NAP1_05550 |
nifR3 |
-32 |
5.8 |
TGCCCAATATTTAGGCA |
|
Novosphingobium aromaticivorans DSM 12444
|
|
Saro_1109 |
glnB |
-265 |
5.5 |
TGCCTAAAAATAAGGCA |
|
Saro_1109 |
glnB |
-243 |
4.9 |
TGCGTAAAATTTGTGCA |
|
Saro_0693 |
glnK |
-182 |
5.8 |
TGCTTAAAATTTAGGCA |
|
Saro_0693 |
glnK |
-207 |
3.7 |
TGCCCGGAAACGAAGCA |
|
Saro_1926 |
nifR3 |
-28 |
5.5 |
TGCCTGTTTTTTAGGCA |
|
Sphingopyxis alaskensis RB2256
|
|
Sala_0148 |
glnB |
-229 |
4.6 |
TGCTGCTTTTTTAGGCA |
|
Sala_2326 |
glnK |
-163 |
5.8 |
TGCCCAAAAATTAGGCA |
|
Sala_1277 |
nifR3 |
-38 |
5.7 |
TGCTCAAAATTTAGGCA |
|
Sphingobium japonicum UT26S
|
|
SJA_C1-01910 |
glnK |
-121 |
4.3 |
TGCCCATTTTTTCAGCG |
|
SJA_C1-01910 |
glnK |
-150 |
5.6 |
TGCCTAATTTTTGAGCA |
|
SJA_C1-19360 |
glnB |
-199 |
4.1 |
TGCCCGGAATCCGGGCA |
|
SJA_C1-19360 |
glnB |
-230 |
5.7 |
TGCCTAAAAAATGGGCA |
|
SJA_C1-16750 |
nifR3 |
-28 |
5.5 |
TGCCTGTTTTTTAGGCA |
|
Sphingomonas wittichii RW1
|
|
Swit_1918 |
glnK |
-159 |
5.4 |
TGCCTAAAAAACGGGCA |
|
Swit_1918 |
glnK |
-141 |
4 |
GGCTCAACTTTTAGACA |
|
Swit_4832 |
glnB |
-145 |
5.4 |
TGCCCATTTTTCAGGCA |
|
Swit_0245 |
nifR3 |
-27 |
4.9 |
TGCCGCTTTTTTAGGCA |
Export
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Regulatory Sites
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