Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator NtrC in Sphingomonadales

Properties
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Sphingomonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Erythrobacter litoralis HTCC2594
ELI_13865 glnK -134 4.8 TGCGTATTCTTTGGGCA
ELI_13865 glnK -152 4.7 TGACTAAAAATTAGGCC
ELI_01665 glnB -237 5.8 TGCCTAAATTTTAAGCA
ELI_06285 nifR3 -31 5.9 TGCCCAAATTTTAGGCA
Erythrobacter sp. NAP1
NAP1_00830 glnB -208 5.9 TGCCCAAAATTTAGGCA
NAP1_12238 glnK -164 4.6 TGCTCAAAAAATAAACA
NAP1_12238 glnK -145 4.2 TGATTAAACCTTAGGCA
NAP1_05550 nifR3 -32 5.8 TGCCCAATATTTAGGCA
Novosphingobium aromaticivorans DSM 12444
Saro_1109 glnB -265 5.5 TGCCTAAAAATAAGGCA
Saro_1109 glnB -243 4.9 TGCGTAAAATTTGTGCA
Saro_0693 glnK -182 5.8 TGCTTAAAATTTAGGCA
Saro_0693 glnK -207 3.7 TGCCCGGAAACGAAGCA
Saro_1926 nifR3 -28 5.5 TGCCTGTTTTTTAGGCA
Sphingopyxis alaskensis RB2256
Sala_0148 glnB -229 4.6 TGCTGCTTTTTTAGGCA
Sala_2326 glnK -163 5.8 TGCCCAAAAATTAGGCA
Sala_1277 nifR3 -38 5.7 TGCTCAAAATTTAGGCA
Sphingobium japonicum UT26S
SJA_C1-01910 glnK -121 4.3 TGCCCATTTTTTCAGCG
SJA_C1-01910 glnK -150 5.6 TGCCTAATTTTTGAGCA
SJA_C1-19360 glnB -199 4.1 TGCCCGGAATCCGGGCA
SJA_C1-19360 glnB -230 5.7 TGCCTAAAAAATGGGCA
SJA_C1-16750 nifR3 -28 5.5 TGCCTGTTTTTTAGGCA
Sphingomonas wittichii RW1
Swit_1918 glnK -159 5.4 TGCCTAAAAAACGGGCA
Swit_1918 glnK -141 4 GGCTCAACTTTTAGACA
Swit_4832 glnB -145 5.4 TGCCCATTTTTCAGGCA
Swit_0245 nifR3 -27 4.9 TGCCGCTTTTTTAGGCA
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Regulatory Sites [ FASTA format ] DOWNLOAD