Regulons of Roseburia intestinalis L1-82

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArgR	Arginine	Arginine biosynthesis	4	6
TF	BirA	Biotin	Biotin biosynthesis	2	3
TF	CzrA	Zinc ion, (Zn2+); Silver ion, (Ag+); Nickel ion, (Ni2+); Copper ion, (Cu2+); Cobalt ion, (Co2+); Cadmium, ion (Cd2+)	Zinc resistance; Nickel resistance; Copper resistance; Cobalt resistance; Cadmium resistance	2	2
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	5	3
TF	HisR	Histidine	Histidine biosynthesis	3	2
TF	HrcA	Heat shock	Heat shock response	7	5
TF	IdeR	Iron ion, (Fe2+)	Iron homeostasis	8	6
TF	LexA	DNA damage	SOS response	5	6
TF	NiaR	Niacin	NAD biosynthesis	2	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	1
TF	PdxR	Pyridoxal-5-phosphate	Pyridoxine biosynthesis	1	1
TF	Rex	NADH	Energy metabolism	19	9
TF	UxuR		Glucuronate utilization	7	5
TF	YtrA		Multidrug resistance; Multidrug efflux; Antibiotic resistance	1	1
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	3	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	5	3

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --